Coregonus clupeaformis (lake whitefish): 121558078
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Entry
121558078 CDS
T08357
Name
(RefSeq) calmodulin-regulated spectrin-associated protein 1-B-like isoform X1
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121558078
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121558078
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121558078
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121558078
Intermediate filaments
Intermediate filament-binding proteins
121558078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CAMSAP_CC1
CH
Motif
Other DBs
NCBI-GeneID:
121558078
NCBI-ProteinID:
XP_041727498
LinkDB
All DBs
Position
18:complement(39889643..39939333)
Genome browser
AA seq
1582 aa
AA seq
DB search
MDVDMCGGGDGTRRNMDSAGEGTMEIVPLEMYDSARAKIDANLRWLFAKAYSIDHIPEDL
RDPFYTDQYEQEHIKPPVLHLLLSCELYCRVCSLILKTDQAASLQSHMSVIQALSRKGIY
VMESDDAPVTDADLACVPIKMSAHMPMIDALMMAYTVEMISIEKVVASVKRFSTFSASKE
LPFDLEDAMVFWINKVNLKMREITERELKAKQHPLESPSHQKVRYRRENALCRQLPFFPL
LEDLMRDVCDGAALLIVVHYYCPDLMKLHDICLKEVTSIADSLYNIQLLKQFSNEYLNKS
FYLTMEDMLYSPLVLKHNVMVFIAELFWWFETVKPEFVQPRTEDFKDARAMAQPKSARPS
VPISNATKRSFQVTPGIPEASLSVSAQSSPDGRYVLYPAEDSDPLNKGGPGEAFSPSHPL
LPLRQRQQKQQQGEDGSGTRNRSNSLENKPPRGSVQAWSDRRQRPTSTLNPYTFGISATD
SDADIASGDSVSLGRSISKDSLASNVVNLTPQGHTLIGHAQVGRAPVSPAPRRVNGHGLL
GNVNMEEELVAVMRTDASASLPSQGEVTQPTAGAEPKDSSYLEPLMPAVLKSAKEKSVCL
NKEEESGEVGRSRGGGSIRRVEGGPELVASARRKTPTSLNRTYTPASSGEFDLSTETSLA
GPLQGQGAINPMVTSSVDPSSREPAGGFYLHSDSDDQKPWQDQEPDLGEADEEDLDEALT
TKDPTRPRKTFDEEEESAKLQEDLKVKENRNKKKGDDGGSGRSSPCLSTHSQASSLASGS
VRMTSFAERKAQQRFGSNQDLRTSASSSQRTTPDGSECSGPLSLPTSRRLNRDQSPSSPQ
GGRGNGGTIVLASELVQLHMQLEEKRKAIEHQKKKMEMLSARQRQKLGKAAFLHIVKKGK
SDTLPNPLKPDYYCKEELNGDKGGSSKDDSCVDALRGAKEPESATSPVPGALEMVDRKGS
CSPGLLLDEELDLNECNQSIEMLNDAIGSIQQQMMQLSLQQDLLMKQNVQSPPRVLSPCS
ANEKTSASEPKAQPAVHFVDLGSCAPTTGTAPSRKPPKLSSARGPRTKPSELKLAKEQGR
PVLASNRAITPSHSLETLPHLRQFPGGRSPRTDHPDASPRTPSAGGETISGQDKPGHNAT
FRLHDEANLRTAARIDPVVVTPEMSFDPCLSSTLREGELNSSDGSGTENIPSEEVSRSKA
PLIEVDLSDLKDPEEMEGDRGQESTMDGEDREQKSGLGFFFKDEQKAEDELAKKREAFLI
RQQKKAEEARLRKLQLEAETEQKRDEARRKAEEDRMRKEEEKARRELIKEQYLRRKQQEL
MEEQGLGSPAKPKTPKTKPKKPSHQTLRPKSVFSREEISSDTFSSKCSSSTPDNLSSVQS
GSSLSLASAATTEADSFNCGGPCSQRGEFVESFPGLSRNASRNTERDWDNGSTASSITSM
AEYTGPKLFKEPSSKSNKPIIFNAISHCCLAGKVNEPQKNTLLEELERVDAHHLMILFRD
GGCQFRGVYSYFPDTEEILKLTGTGPKSISKKMIDKLYKYSSDRKQFTVIPAKTVSVSID
AITIHNHLWQAKRTTVPKKSGK
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatatgtgtggtggtggggacggcaccagaagaaacatggattcagctggt
gaagggacaatggagattgtacctttggaaatgtacgactcagccagagcaaaaatagac
gccaacctgcgatggctgttcgccaaggcatacagcattgaccacatcccagaggacctg
agggatccgttctacacagaccagtatgagcaggagcacatcaagccccccgtcctccac
ctgctgctgtcctgtgagctgtactgccgggtgtgttccctcatcctgaagacagaccag
gccgcctcgctgcagtcacacatgtcagtcatccaggccctcagccgtaaaggcatctac
gtcatggagagtgatgacgcccctgtcacagacgccgacctcgcctgtgtgcccatcaaa
atgagtgcccacatgcccatgatcgatgccctgatgatggcctacactgtggagatgatc
agcatagagaaagttgtggccagtgtcaaacgcttctccaccttcagcgcctccaaggag
ctgccctttgacctggaggacgccatggtcttctggatcaacaaggttaacctgaagatg
agggagatcacagagagagagctgaaagccaagcagcacccgctggagtctcccagtcat
cagaaggtgaggtaccgcagggagaacgccttgtgccgccagctgcccttcttccccctg
ctggaggatctgatgagggacgtgtgtgacggagccgccctcctcatcgtggtccactat
tactgccccgacctcatgaagctccacgatatctgtctgaaggaggtgacctccatagct
gacagtctgtacaacatccagctgctcaagcagttctcaaatgaatatctcaacaagagc
ttctacctaaccatggaagacatgctctactctccactggtgctcaagcacaatgtgatg
gtgttcatcgctgagctcttctggtggtttgagaccgtcaagccagagtttgtccaaccc
aggacggaggacttcaaagatgcccgagccatggctcagccgaagagtgcccgcccctca
gtgcccatctccaacgccaccaagcgcagcttccaggttacccctggcatcccagaggcc
tcgctgtctgtttctgcccagagcagccctgatggcaggtacgtcctgtaccctgctgaa
gactctgaccctcttaataagggaggtcctggggaagccttcagcccctcccacccactc
ctccccctaaggcagagacagcagaagcaacagcagggagaagatggatcaggtaccaga
aaccgctccaactccttggagaacaaaccgccacgaggctcagtgcaggcctggtctgat
aggagacagaggccgacgtcgacgctcaacccgtacacatttggcatctcagcaactgac
agcgacgctgacattgcctctggtgacagtgtgagtctgggccgctccatcagtaaagac
agtctggcctctaacgtagtcaacctcaccccccagggccacaccctgatcggacacgcc
caggtaggccgcgccccagtcagccccgccccccgccgagtcaatggccacggccttctg
ggaaacgtcaacatggaggaggagcttgtggcagtgatgaggactgacgcgtcagcctct
ctccccagtcagggagaggtgacgcagccaactgctggggccgagcccaaggatagttct
tatttagaaccgctgatgcctgctgtgttaaaatcggcgaaagagaagtctgtatgcctg
aacaaggaggaggagagcggggaggttggtcgatctcggggaggggggtctatccggaga
gtagaggggggacctgaacttgtggcgtcggccaggaggaaaacccccaccagcctaaac
cggacctacactcccgcctctagtggggagtttgacttgtctactgagacctcactggct
gggccactccagggacagggggccatcaatcccatggttaccagcagtgtggacccctcc
tccagagagccagcaggtggcttctacctccactctgacagcgacgaccagaagccttgg
caggaccaggagccagacctgggcgaggctgatgaggaggacctggatgaagccctcacc
accaaggacccaaccaggcccaggaagacctttgacgaggaggaagagtcagccaagctg
caggaggacctgaaggtgaaggaaaataggaacaagaagaaaggggatgatggtggtagt
ggtcgctccagcccctgtctcagcacccactcccaggccagcagcctagccagcggcagc
gtacgcatgaccagcttcgctgagcggaaggcccagcagcgctttggcagcaaccaagac
ctgcgaaccagcgcctccagctcccaaaggaccaccccggacggctcggagtgcagtggg
cccctgtccctgcccacctcccggaggctgaatagggaccagagcccctcctcgccccag
gggggacggggaaacggaggtaccatagtgctggcttctgagctggttcagctccacatg
cagctggaggagaagaggaaagccattgagcaccagaagaagaagatggagatgctgtca
gccaggcagagacagaagctgggcaaagctgcctttctgcacatcgtcaagaagggcaag
agcgacaccctgcccaacccgctcaaaccagactactactgcaaagaagagctcaatggg
gacaaagggggaagttcaaaagacgactcttgcgtggatgcactgagaggggccaaagag
cctgagtctgccacctcgccagtcccaggtgccttagagatggtggacaggaagggcagc
tgtagtcctggtctgctgctggatgaagagctggacctgaacgagtgtaaccaatccatc
gagatgctgaatgacgctatcggcagtatccagcagcagatgatgcagctgtccctccag
caggacttgctgatgaaacagaatgtacagtcccctcccagggtcctgtctccctgctca
gccaacgagaagaccagcgcatctgaacccaaggctcaacctgccgtccactttgtggat
ttgggcagctgcgcaccaaccaccggcaccgctccatccaggaaaccccccaagctgagt
tcggcccggggccccaggaccaagccctcagagctgaagctggccaaggagcaaggcagg
ccggtcctggcctcaaacagggctatcaccccgtcccacagtctggagaccctgcctcac
ctgaggcagtttcctgggggcaggtcccccaggacggaccaccccgacgccagtcccaga
accccctctgcaggtggagagacaatcagtgggcaggacaagcctggacataacgccacc
ttcaggctccacgacgaggctaacctgcgcacggcggcccgtatcgacccagtggtcgtc
accccagaaatgtcctttgacccgtgcctgtccagtactctgagggagggggagctgaac
tcctctgacggctcggggacggagaacatcccctcagaggaagtgtcgaggagcaaagcc
cccctgatcgaggtggacctgtcagacctgaaagacccagaggagatggagggagacagg
gggcaggaaagcaccatggatggggaagacagggaacagaagtctggcctgggattcttc
ttcaaggatgaacagaaggcagaggatgaactagctaagaagagagaagcgtttctaata
aggcagcagaagaaggctgaggaggcccggctacgcaaactgcagctggaggctgagacg
gaacagaaacgggacgaggccaggcggaaggcggaggaggacaggatgaggaaggaggaa
gagaaggcccgtagggagctgataaaggagcagtacctgaggaggaagcagcaggagctg
atggaggagcagggtctcggcagcccggccaagcccaagaccccaaagaccaagcccaag
aaacccagtcaccagactctcagacccaagtctgtgttcagcagagaggagatctccagc
gacaccttctcctccaagtgctcatcttcaacccctgacaacctgagcagtgtccagtca
ggctctagtctgtccctggcctctgctgccacaaccgaggcagacagcttcaactgtgga
gggccatgctcccaacggggtgagtttgtggagtcgttcccaggcctgagtcggaacgcc
agtcggaacactgagagagactgggacaacggatccactgcgtcttccatcacttccatg
gcagaatacactggtcccaagctgttcaaggagcccagttccaagtccaacaagccaatc
atcttcaacgccatttctcactgctgcctcgccggcaaagtcaacgaaccccagaagaac
acccttctagaggagctggagagggtagatgcccaccacctgatgatccttttcagggat
gggggctgccagttccggggggtctactcctacttcccagacactgaggagatcctcaag
ctgaccggcacgggccccaagagcattagcaagaagatgatcgacaagctttacaagtac
agctcggaccgcaagcagttcactgtcatccccgccaagactgtgtctgtcagcatagat
gccatcaccatccacaaccatctgtggcaggccaagagaaccactgtgccaaagaagagc
gggaaataa
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