Coregonus clupeaformis (lake whitefish): 121558079
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Entry
121558079 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121558079
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121558079
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_At5g56370
LRR_LRWD1
Sp-CxC
LRR_6
Motif
Other DBs
NCBI-GeneID:
121558079
NCBI-ProteinID:
XP_041727502
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Position
18:39503303..39518431
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AA seq
795 aa
AA seq
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MIPITELRYFVDCQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
VNQTCRRYFNATQSAPLLLEPKGIQYNLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHT
LIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEERDPKPHKMNGSMD
KKASCVSEDVEASVPMLQKTKSRLEQGIVDRTETGVLDKKEGEQAKALFEKVKKFRLHVE
EGDIVYRLYIRQTIIKVIKFILIICYTGYYVHKIQFSVDCSVDIESLTGYSMYRCAHPLA
TLFKILACVYISLVGVYGLICMYTLCWMLRHSLKKYSFESIREESSYSDIPDVKNDFAFM
LHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLDKLRQRITKNSQEKLELHLFML
SGIPDTVFDLMELEVLKLELIPDITIPPIIAQLVNLKELWLYHTPAKIEAPALAFLRENL
KSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNL
TKLPQVVTDVGVHLQKLSVNNEGTKLMVLNSLKKMVNLTELELIRCDLERIPHSIFSLHN
LQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLNNLERLYLNRNKID
NIPSQLFYCRKLRFLDLSHNNLTYIPADVGYLQNLQYLAVTANRIETLPNELFQCKKLRT
LNLGNNCLTSLPSRFGELTGLTQLELRGNRLDCLPVELGECRQLKKTGLVVEEDLFNTLP
TEVKEQLWKVDKETA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatccccatcactgagctgcgctactttgtagactgtcagccggcctaccgtatcctg
aagccatggtgggacgtcttcactgactacatctccatagtcatgctgatgatcgccgtg
ttcgggggaacgctgcaggtcacccaggacaagatgatctgcctaccctgcaagtgggtg
gtcaaccagacctgcaggaggtatttcaacgccacccagtcggccccgctgttgttggag
cccaaagggatccaatacaacctggatcgccaccagtacaactacgtagacgccgtgtgc
tacgagaaccgcctgcactggttcgccaagtacttcccctacctggtgctacttcatacc
ctcattttcctggcctgcagtaacttctggttcaagttcccccggactagttccaaactg
gagcactttgtgtccatcttactcaagtgttttgactctccctggaccaccagggccctg
tctgagacagtggtggaggagcgcgaccccaagccccacaagatgaacggctccatggat
aagaaggcgtcatgtgtcagcgaggacgtggaggccagcgtccccatgctccaaaagaca
aagtctcgcctggagcaggggatcgtggaccgcactgagacaggcgtcctggataaaaaa
gagggcgaacaagcaaaagctctgttcgaaaaggtgaaaaagttccgcctacatgtggaa
gagggagacattgtgtacaggctctacatccgacagactattatcaaagtcattaagttc
attttgattatctgctatacagggtattatgtgcacaaaattcagttcagcgtggactgt
agtgtggatatagagagcctcacggggtacagcatgtatcgttgtgcccatcctctggcc
acgctgtttaagatcctagcctgcgtctacatcagtttagtgggggtttacggcttaatt
tgcatgtacactctttgttggatgctgcggcactcgctgaagaaatactcctttgagtcg
atacgagaggagagcagttacagcgacataccggacgtaaagaacgactttgctttcatg
ctgcacatgatcgaccagtacgacccgctgtactccaaacgctttgccgtcttcctgtcc
gaggtgagcgagaacaagctgcggcagctcaacctgaacaacgagtggactctggacaaa
ctgaggcagaggatcaccaagaactcccaggagaagctggagctgcacctcttcatgctg
agcggcatcccagacacagtgtttgacctgatggagctggaggtgctgaagctggagctc
atcccagacatcaccatccctcccatcatcgcccagctggtcaacctgaaggagctttgg
ctgtaccacaccccggctaagatcgaggctccggccctggccttcctcagggagaacctc
aagtccctccacatcaagttcaccgacatcaaggagatccctctgtggatctacagcctg
aagaacctgagcgagctgcacttgacagggaacctgagcgcagagaacaaccgatacatt
gttattgatgggctacgggagctgaagaggctcaaggtgctccggctgaagagcaacctg
accaagctacctcaggtggtgactgacgtgggggtgcacctccagaagctgtcagtcaac
aacgagggcaccaagctgatggtcctcaacagcctgaagaagatggtgaacctgactgaa
ctggagctgatccgctgtgacctggaacgcatcccacactccatcttcagcctgcacaac
ttgcaggagattgacctcaaggacaacaacctgaagaccattgaggagatcatcagcttc
cagcacctgcaccggctggtctgccttaaactctggtacaaccagatcgcctatattccc
atccagatcggcaccctcaacaacctggagcgtctctatctgaacaggaacaagatcgat
aatatccccagccagctgttctactgtcgtaagctgcgcttcctggacctgagccacaac
aacctcacctacatcccagcagacgtagggtacctgcagaaccttcagtacctggcagtc
accgccaaccgaattgagaccctgcccaacgagctgttccagtgtaagaagctccgtact
ctgaacctgggaaacaactgcctgacgtctctgccgtcgcgcttcggggagctgacgggc
ctgacccagctggagctgagggggaacaggttggactgtctgcccgtggagctcggggaa
tgcaggcagttgaaaaagactggtctggtggtggaagaagatctcttcaacaccctaccc
accgaggtgaaggagcagctgtggaaggtggacaaggagactgcctga
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