Coregonus clupeaformis (lake whitefish): 121558168
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Entry
121558168 CDS
T08357
Name
(RefSeq) sphingomyelin phosphodiesterase 5
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121558168
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
121558168
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_PGAP2IP
Motif
Other DBs
NCBI-GeneID:
121558168
NCBI-ProteinID:
XP_041727580
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MVLRESPFPNCFVEGLHAVGWGLILPCFWFLDRLIAVCMSTSLERTQRHEQECYLHPLKV
FFGFILFLALFLVTAPLAFLGFLLWAPLQAARRPFSYHQEPPSRPAPADEGERNLGFEAG
ANKATFGFATANLCLLPDGIARFNNLGHTQRRATAIGRSIVQGVNRPHIRIFVDSPSSCG
TLSPSSSLLPGPSTTSPVSYGATDPAFQPPPQAPPTVKAHSDEDQADGAVPTTTTPPKPS
DSNCVVYVPCDDTEDPSPSPAPVINTNQNSNQQGRKGHRNPPRALHTQGVAQRGQAGQDD
VPWEVSSLFPANVDILCLEEVFDKRAALKLTNTLGPLFNHILYDVGVYAWQPPGSCSSFK
FFNSGLFLASRYPVLEAQYHCFPNGRGEDALAAKGLLSAKVLVGQNQKEKKLVGYFNCTH
LHAPEGEGEIRCEQLNMITKWIQEFQATNSKPDEVVVFDMLSGDFNFDNCSPDDSLEQKH
SLFEEYRDPCRVGPGQEKPWVIGTLLEQPTLYHEDVRTPENLQRTLEREEVRKQYISSPV
ALDGCPLVYPELGQPWVGRRIDYILYRESSISKHCQTEIEEFTFVTQLAGLTDHIPVGLR
LNVILDSDNAQSEE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcgggagtccccattccccaactgctttgtggagggcctccatgcagtgggc
tggggcctcatcctgccctgcttctggttcctggaccgcctcattgccgtctgcatgtcc
accagcctggaacgcacccagcgacacgagcaggagtgttatctccaccctctcaaggtc
ttcttcggcttcatcctcttcctcgccctcttcctggtcacggctcccctggccttcctg
gggttcctgctctgggctcccctccaagccgcccgcaggcccttctcctaccaccaggag
cccccgtcaaggccagcaccagccgatgagggggagaggaacctgggctttgaggcaggg
gccaacaaggccacttttggctttgccactgccaacctgtgtctgttgccagacggcatt
gcacgcttcaacaacctggggcacacgcagcgccgtgccaccgccatcggccggagcatc
gtgcagggtgtgaaccggccacacatccgcatcttcgtggactcccccagcagctgtggc
accctcagcccctccagtagcctgctccctggcccctccaccaccagccctgtctcatac
ggtgctacagacccagccttccagccaccaccccaggctcctcctactgtgaaggcccat
tcagacgaggaccaagctgacggagcagtcccaacaacaacgacgccccccaagcccagt
gactcaaactgtgtggtgtacgtgccctgtgacgacaccgaggacccttccccttctcct
gcccctgtcatcaacaccaaccagaactccaaccagcagggccggaagggccacaggaac
cctccgcgggctctacacactcagggggtcgcccagcgcggccaggctgggcaagacgac
gtgccctgggaggtgtcctctctcttcccggccaacgtggacatcctgtgtctggaggag
gtgtttgataagagggcagctctgaagctgaccaacaccctggggcccctgttcaaccac
atactgtatgatgtaggggtgtacgcctggcagcctcccggcagctgctcctccttcaag
ttcttcaacagcggcctgttcctggccagccgttacccagtgctggaggcccagtaccac
tgtttccctaatggccggggggaggatgccctggctgctaaaggcctgctctctgccaag
gtgctagttggccagaatcagaaagagaagaagctggttggatattttaactgcacacac
ctccatgcacctgaaggtgaaggggagatccgctgtgagcagctcaacatgatcaccaag
tggatccaggagttccaggccaccaatagcaagcctgatgaggtggtcgtgtttgacatg
ctttctggggatttcaacttcgacaactgctcacctgatgacagtctagaacagaagcac
agtctgtttgaggagtacagagacccctgccgggtcgggcctggccaggagaagccctgg
gtcattggcactttgctggaacagcctactctgtatcatgaggatgtaaggaccccagag
aatcttcaaaggaccctggagagagaggaggtgaggaagcagtacatctcctctcctgtg
gccctggacggctgtcccctggtctaccctgagttgggtcagccctgggtggggcgccgc
attgactacatcctctacagagagagctccatctccaagcactgccaaactgaaatcgag
gagttcacctttgtgacccagcttgctggcctcaccgaccacattccagtgggcctgagg
ctcaacgtgatccttgactcagacaatgcccagtccgaagagtga
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