Coregonus clupeaformis (lake whitefish): 121558191
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Entry
121558191 CDS
T08357
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121558191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121558191
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
121558191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
121558191
NCBI-ProteinID:
XP_045070707
LinkDB
All DBs
Position
Unknown
AA seq
1915 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSDTHLDTDDLLDGSSDPSSSFFSAVGCHVPEVLPP
VQLPSNEQPGLPRVSVDLDFLEDDVILGGSPGDGSSNAMEPCDILQQSLAEANITEQSLQ
EAEAELDLDSFDLTMPGLTQVVQTLPCTDSLTGPGGTAVGVGLPIFSGAPGSPGTPPQAT
ADILGSVLAQQGLQFGPQVMNKAQAISMQQVAGLGNVTLQALPNGCQSGHLGLGRIQVMG
QPTVMTMNQSGQPILAKAMGAGGQGGLGGGLLIQGGKATLGSPALNGPAVCVGSTNSGSS
TMTAAGSLGQQGQNLIIQRTPTPIQPKPPQGGAAIQPKLFKQQQAQAHVLQNDANKALGV
QQVPVSAAQNLAFLTGKPGSNMVLTSQSGVPQQASHHPSGKALSVHLLNQPGSIMLGGQN
HQFLLPQQLAGGQILTQHPGGHIITSQGPGGQLITNQILAQHQNINLGQVLTSQGHPLLQ
LQPGQMGVGHQLFQIPVTLSQSQSHPVTGHQAHTVIQGMPLQNSLAMLSQVEGLSPAVSL
QPALQPQPGGVPSSGVGGAAAMAQGQPGESVPVLGSSTDQAAHPGQAPQPSSILSMQAGP
SVSMSVPSSSSPSLSVSTTLIPHLSQQHSPGSRVVFTGPQGSSMILSQEQLQMFLQQDQR
QTENDPVHTMSVGVPASVIVSSNSSSGHASSGHDCQLAEAAVVNQMPQAAGQQQQLKLQS
LSPSQPLASHTALSLSDSPQPSPRPQPSPQSWPPSQPLSWPPSQPQTPTRSCTPSSLPPM
LIIQNQIPGSSQPAPQQQQQIHLQPQPLPRPPSQPSLYQPDVPPPSCSPKPPQILQAPLA
GFQFTASQVGAPGGGVVKTQVPLQFPVLTAEQQHHLQLVGAQLQTLSTIAQPSPQQKQLL
DKLHQVQQNILLQANQQQQQQSQPQQHRRQQQDLLAPQTSVLVKTPATASNDVLSGVQVN
QGGMAPASLNQSVHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQS
LHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQA
GQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQS
LNQAGQQSLHQAGQQSLNQAGQQSLHQAGQQSLNQAGQQSLNQAGQQSLNQAGQQSLHQA
GQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQS
LNQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLHQAGQQSLNQAGQQSLHQA
GQQSLHQAGAVQVGGMESGSGLGQMTFSPDLASLQTQTATMKMPFSMAKPSKEARMLEQL
RKQQGSVLHPDYSSPFQCFEDTLIRLVPYHLYQGTATSPHDYHRVDDEFDSVSSQLLKRT
QAMLDKYRHLLFEESTRLGPSAEMVMMDRMFIQEEKISLGQDRILARDRPEEYVANSRMM
EIESVAASMAQPQSQPQLQPQPQPQPQPQPTMRSGVAPTPTPTPTPTQAPTPTPIAPAHF
PSTKLVIKQGGAGASVSWSSSPAPVARSGSGVRQTADTQRHRSSFSRSPPPPSCHSPYHP
SSSSCPAEDDDDALPQRSSKPPMKTYAARPRIGLKLKIKQEAGFNTAPDTPYHPAPTSAD
TPYHPARTGADTPYHPARTGADTPYHPARTSADTPYHPARTSADTPYHPARTSADTPYHP
ARTDTPYHTARTSADTPYHPARTRADTSYHPARTSADTPYHPARTGADTPYHPARTRADT
PYHPARTDTPYHPARTSTDTPYHPARTSTDTPYHPARTRTDTPYHPARTRTDTPYHPART
SADTPYHPARTSADTPYHPARTGADTPYHPARTGADSPKSPSSSSTSHASFCNCH
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaagacggcaggtgcctgctagatgtaatttgtgacccagaagcacttaac
gattttcttcatggatcagacacccatctggacactgatgacctattggatggctcgagc
gacccctccagctccttcttctctgccgttgggtgccacgttccagaggtcctgccacca
gtccagctgccgtccaatgagcagcctggcttgccccgggtcagcgttgacctggacttc
ctggaagatgacgtcatcctgggcggatcgccgggtgacggcagtagtaacgccatggag
ccatgtgacatcctgcagcagagcctggcggaggccaacattacagagcagagcctgcag
gaggccgaggcagagttggacctggactccttcgacctcaccatgcctggcctgactcag
gtggtccagacgctgccctgtacagacagcctgactgggcctggagggaccgctgtgggg
gtggggctccccatcttctctggagctccaggctcccccggcacccctccccaggccacg
gctgacattctgggctcggtgctggcccaacagggcctccagtttgggccccaggtcatg
aacaaggcccaggccatcagtatgcagcaggtggcaggcctgggtaacgtcaccctccag
gctctacctaatggctgccagtcaggacacctgggactggggcggatacaggtgatgggc
cagcccactgtgatgactatgaaccagtcaggacagcccatcctggccaaggctatgggg
gcaggggggcagggcggactgggagggggacttctgatccaaggaggcaaagccactctg
ggatctccagctttaaacggcccggcggtgtgtgtcggcagcactaacagtggcagtagc
accatgactgctgctggaagcttgggtcaacaggggcagaacctgatcatccagcgaacc
ccgacccccatccagcccaaacccccccaggggggcgcagccatccagcccaaactgttc
aagcagcagcaggcccaggcccacgtcctccagaacgatgccaacaaggcccttggggtg
cagcaggtccctgtctccgctgcccagaatctagccttcctgacaggcaagcctggctct
aacatggtcctgacctcccagtcgggggtcccccagcaggcatcccaccacccctctggg
aaagccctcagtgtccacctcctcaaccagcccggcagcatcatgctgggggggcagaac
caccagttcctcctgccgcagcagctagccgggggacagatcctcacgcagcaccctggg
ggccacatcatcacctcccaggggcctgggggtcagctgataaccaaccagatcctggct
cagcaccagaacattaacctgggccaggtgctgacgtctcagggccaccctctgctccag
ctgcagccgggacagatgggggtgggacatcagctcttccagattcctgttaccctctcc
cagagccagagccacccggtcacgggccaccaggcccacacagtgatccagggcatgccc
ctgcagaactccctggccatgctgagccaggtagaaggtttgagtcctgctgtcagcctg
caacccgctctgcagccgcagccagggggtgttcccagcagcggggtgggtggggcggct
gccatggcgcagggccagcctggggagagtgtgccagtgctggggagttctacagaccag
gcagcccaccctggacaagccccgcagccctcctccatcctctctatgcaggctgggccc
tctgtctccatgtctgtcccctcctcttcctctccgtccttatctgtgtccaccacgctg
atcccccacctatcccagcagcacagccccgggagcagggtggtcttcacgggcccccag
ggctccagcatgatcctcagccaggaacaactccagatgttcctccagcaggaccagcga
cagacagagaatgaccctgtccatactatgtcagtgggcgtgccagcatccgttatcgtc
agcagcaacagcagctctggccacgcctcctcaggccatgactgccaattagctgaggca
gcagtggtaaaccagatgccccaggcggccggccagcagcagcaactgaagctccagagc
ctgtccccctcccagcccctggcctcccacaccgccctctctctgtcggacagcccccag
ccctccccccgcccccagccctccccccagtcctggcccccctcccagcccctgtcctgg
cccccctcccagccccagacccccacccgatcctgcaccccctcctctcttcccccaatg
ttaattatccagaaccagatcccaggctcctcccagcctgccccacaacaacaacaacag
atacacctccagccccagcccctaccccggcccccctcccagccttctctctaccaaccg
gacgtcccccctccctcctgctcccccaaacccccacagatcctccaggcccctctggca
gggttccagttcactgctagccaggtgggggcccccgggggtggagtggtgaagacccag
gtccccctgcagttcccggtcttaacagcagagcagcagcaccatctgcaactggttggt
gctcagctccagacgctgtctaccatcgctcagccctctccacaacagaaacaactgctg
gacaaactacaccaggtccaacagaacattctactacaggccaaccagcagcagcagcag
caaagccaaccccaacaacatcgtcgtcaacaacaagacttgcttgctcctcagacgtct
gtgctggtcaagactcctgccacagcatccaatgacgtgttgtcaggagttcaggtgaac
caggggggcatggctccagctagccttaaccagtcagtacaccaggcgggtcaacagtcc
ctacaccaggcgggtcaacagtccctacaccaggctggtcaacagtcactacaccaggcg
ggtcaacagtccctacaccaggctggtcaacagtccctacaccaggcgggtcaacagtcc
ctacaccaggctggtcaacagtccctacaccaggctggtcaacagtccctacaccaggcg
ggtcaacagtccctacaccaggctggtcaacagtccctacaccaggctggtcaacagtcc
ctacaccaggcgggtcaacagtccctacaccaggctggtcaacagtccctacaccaggct
ggtcaacagtccctacaccaggctggtcaacagtccctacaccaggctggtcaacagtcc
ctacaccaggctggtcaacagtccctacaccaggctggtcaacagtccctacaccaggct
ggtcaacagtccctacaccaggctggtcaacagtccctacaccaggctggtcaacagtcc
ctaaaccaggctggtcaacagtccctacaccaggctggtcaacagtccctaaaccaggct
ggtcaacagtccctacaccaggctggtcaacagtcactaaaccaggctggtcaacagtcc
ctaaaccaggctggtcaacagtccctaaaccaggctggtcaacagtccctacaccaggct
ggtcaacagtccctacaccaggctggtcaacagtccctacaccaggctggtcaacagtcc
ctacaccaggcgggtcaacagtccctacaccaggctggtcaacagtccctacaccaggct
ggtcaacagtccctacaccaggctggtcaacagtccctacaccaggctggtcaacagtcc
ctaaaccaggctggtcaacagtccctacaccaggctggtcaacagtccctacaccaggct
ggtcaacagtccctacaccaggctggtcaacagtccctacaccaggctggtcaacagtcc
ctacaccaggctggtcaacagtccctaaaccaggctggtcaacagtccctacaccaggct
ggtcaacagtccctacaccaggctggggctgtgcaggtgggggggatggagtcagggtca
ggtctgggtcagatgaccttcagccctgatctggcctctctacaaacacagactgctact
atgaagatgcctttcagtatggctaaacccagcaaggaagccaggatgttggagcagctg
aggaagcagcagggttcagtcctccacccagactacagctctcccttccagtgctttgaa
gacaccctgatccgcctggtgccttaccacctctaccagggcactgccacctcaccacac
gactaccacagagtggatgatgagtttgacagtgtttccagccagctcctaaagagaaca
caggccatgctggataaatacagacacctgctttttgaggaatcaactcgccttggcccg
tcagctgagatggtaatgatggacaggatgtttattcaggaagagaagatctctctggga
caggaccgcatcctcgccagggacagacctgaggagtatgtggccaactcaaggatgatg
gagattgagagtgtagctgccagcatggcccagccccagtcgcagccgcagctccagccc
cagccgcagccccagccccagccccagcccaccatgaggagtggtgtagcccctactcca
actcctaccccaacacctactcaggccccaactcctacacccatcgcaccggcccacttc
ccctccaccaagctggtgataaagcagggtggagcgggggcgtctgtctcctggtccagc
tccccagctcctgtggctaggtcgggttcaggggtgagacagacagctgacacccagagg
caccgctcctccttcagccgctctcctccacctccctcctgtcactcaccctatcaccct
tcctcctcctcttgtccagctgaggatgatgatgatgctctcccccagaggagcagtaaa
ccccccatgaagacgtacgccgcccgcccacgcatcggcttgaagctcaagatcaagcag
gaggcggggtttaacacagccccagacacaccctaccacccagccccaaccagcgccgac
acaccctaccaccctgccagaaccggcgccgacacaccctaccaccctgccagaaccggc
gccgacacaccctaccaccctgccagaaccagcgccgacacaccctaccaccctgccaga
accagcgccgacacaccctaccaccctgccagaaccagcgccgacacaccctaccaccct
gccagaaccgacacaccctaccacactgccagaaccagcgccgacacaccctaccaccct
gccagaaccagagccgacacatcctaccaccctgccagaaccagcgccgacacaccctac
catcctgccagaaccggcgccgacacaccctaccaccctgccagaacccgcgccgacaca
ccctaccaccctgccagaaccgacacaccctaccaccctgccagaaccagcactgacaca
ccctaccaccctgccagaaccagcaccgacacaccctaccaccctgccagaaccagaacc
gacacaccctaccaccctgccagaaccagaaccgacacaccctaccaccctgccagaacc
agcgccgacacaccctaccaccctgccagaaccagcgccgacacaccctaccaccctgcc
agaaccggcgccgacacaccctaccaccctgccagaaccggcgccgactcacccaaaagc
ccaagcagcagcagcactagccatgcctccttctgtaactgtcattag
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