Coregonus clupeaformis (lake whitefish): 121558399
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Entry
121558399 CDS
T08357
Name
(RefSeq) iroquois-class homeodomain protein irx-2-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121558399
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121558399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
121558399
NCBI-ProteinID:
XP_041727731
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSDELARSSSGSAFSPYPGSAAAFTASAS
GFSSPVPYSTDPATGFPSYMSSPYDTQGMAGALSYHPYGSPGYPYQLNDPAYRKNATRDA
TATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNK
SEDEDDGDGERNGDCLEKNLDNSETSAEDEGISLHVDTLTDHSCSAESDGDKVSCRIGDL
VCESGSDTKDKCEDDDDDLELKNDERHRSLSPKAVTSSPLTGLEASVLNHHHRENNNKSC
LDNRMSSGPHNQAVKPKLWSLAEIATSDQKQQQHYPGQTCPSLGLLTSTSSTPSPAVPGT
VYTASSILGRPIYYTSPFYSNYTNYGNFSPLQGQGILQYNSAANDGLTQTAAEVSAMHKH
TTDSLLKTNSNHVEQQFRPSHLYSKKGT
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacccccagggttacctctaccagccgccgggctccctggcgctctactcctgt
ccggcttacggggcttcagccctggccgccccgaggagcgacgagctggccaggtcgtcc
agtggatcagcatttagtccttaccccggatcagctgctgccttcacggcttcagccagc
ggcttctccagcccagtgccatactccacagaccctgccacgggattcccttcctacatg
agctctccttacgacacgcagggcatggccggggcgctcagctaccacccgtacggcagc
ccgggatacccctaccagctcaacgacccggcctaccgcaagaacgcgacccgagacgcc
accgccaccctgaaggcctggctacaggagcacaggaagaacccctaccccaccaaggga
gagaagatcatgttggccatcattactaagatgaccctgacgcaggtgtccacctggttc
gccaacgccaggaggaggctgaagaaggagaacaagatgacgtgggctccccggaataag
agtgaggatgaggatgatggagacggagagaggaatggtgactgcttggagaagaacctt
gacaacagtgagacgtcagcggaggatgaaggtatcagtttgcacgttgataccctcaca
gaccattcttgttcagcggagtctgatggggataaggtgagctgtaggatcggggacctg
gtctgtgagtctgggtcagacactaaggacaaatgtgaggatgatgatgatgatctcgag
ctgaagaatgatgaacgacaccgaagcctgtcacctaaagccgtgacatcatcaccacta
acaggactcgaggcctcggtcttgaaccatcaccaccgggaaaacaacaacaaatcatgt
cttgacaaccgaatgtcttccggtcctcacaatcaagccgtcaaacccaaactgtggtcg
ttagcggagatcgctacttcagatcagaagcagcagcagcattacccggggcagacctgc
ccatccctcggtcttctaacatccacctcctccaccccttccccggccgtccctggcact
gtgtacaccgcctcttctatcctaggacgacccatctactacacgtctccgttttacagt
aattacacaaactatggcaacttcagcccgctgcagggtcaagggattctgcagtataac
tctgctgctaacgacggactcacacagactgctgctgaggtcagcgccatgcataaacac
accactgactctctgcttaaaacgaactctaaccacgttgaacaacagttcagaccctca
catttatactctaagaaaggtacgtaa
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