KEGG   Coregonus clupeaformis (lake whitefish): 121558404
Entry
121558404         CDS       T08357                                 
Name
(RefSeq) signal recognition particle receptor subunit alpha-like isoform X1
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03060  Protein export
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    121558404
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cclu02044]
    121558404
Secretion system [BR:cclu02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   121558404
SSDB
Motif
Pfam: SRP-alpha_N SRP54 SRP54_N MeaB CbiA Fer4_NifH ArsA_ATPase NTPase_1 AAA_16
Other DBs
NCBI-GeneID: 121558404
NCBI-ProteinID: XP_041727738
LinkDB
Position
5:complement(2116125..2126743)
AA seq 661 aa
MLDFFTIFSKGGIVLWCFQGTGVTESFTGPVNALIRSVILQERSGNNSYTHDALSLKYKL
DNEFELVFVVGFQKILTLTYVDKFIDDVQLHFRDRYKNELEQKGALTLLNSHFAFEDDFK
MLLREAEESSKARGPTSMRSFNASLKSQKTVKSMIETKGGDKGKEQGGKKNKNAKKEVSD
IFPLAPTAEPVKGEQAKAPASAQKTVENGNQGLTQEEIIQKKREEFIRKRMGAPAEKPSK
SPKPAKEKPKGKEKRVWTLGGSSTKELDYSQSNGNEAHVAGDQGLDAQADPGMQLSSMKG
DLLAVDYESSEGDEEMEEEDEVERVVVADTSKKIPKKGAFGGMFGMLKGLVGSKSLSQED
MEPVLDKMRDHLIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVASTVKGALQDSLVQIL
QPKRRVDILRDVLEARSQRRPFVITFCGVNGVGKSTNLAKISFWLIENGFTVLIAACDTF
RAGAVEQLRTHQRRLNSLHPPQDHGGRPVVQLYEKGYGKDAAGIAMEAIAYARNQAFDVV
LVDTAGRMQDNTPLMTALAKLIAVNMPDLVLFVGEALVGNEAVDQLVKFNQALADHSMSD
KPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYNDLRSLNARAVVGALMK
A
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgctggatttcttcacgatcttcagtaagggaggcatagtgttgtggtgttttcaggga
accggtgttactgaatccttcaccgggcctgtcaacgcgctgatccgctccgtgatcctt
caggaacgcagtggcaacaactcctatactcatgacgccttgagtcttaagtacaaactc
gataatgagtttgagctggtttttgtggtgggttttcaaaaaatcctgacgctgacgtat
gttgacaagttcatagatgacgtacagctccacttcagggatcgctataagaatgagctg
gagcaaaagggggcccttacactgttgaacagccattttgcatttgaggatgacttcaaa
atgcttcttcgtgaggcggaggagagcagcaaagctcgaggtcccacctccatgaggagc
ttcaatgcttccctgaaatcccagaaaactgtgaagtccatgattgagacgaagggaggg
gataagggcaaggaacagggtggcaagaagaataagaatgccaaaaaagaggtttctgat
atcttccccctagctcctactgctgagcctgtgaaaggggaacaagccaaggctccggcc
agtgcccagaagacagtggagaacggtaaccagggcttgacccaggaggagatcattcag
aagaagagagaggagtttatacgcaagcgcatgggggcacctgcagagaagcccagtaaa
tcccccaagcctgcgaaggagaaacccaaggggaaagagaagcgggtgtggaccttgggt
ggcagcagcaccaaggaactggactacagccagagcaatggcaatgaagcccatgttgct
ggggaccaaggcctggacgctcaagctgacccgggaatgcagctgagctcgatgaagggt
gacttgctcgccgtggattacgagtccagcgagggagatgaggagatggaggaggaagat
gaggtggagagggtggtagttgctgacacaagcaagaaaatccccaaaaagggtgctttt
ggggggatgtttgggatgctcaagggcctggtgggttccaagagtctgagccaggaggac
atggagccagtgctggacaagatgagggaccacctcatcgctaagaatgtagcagccgaa
attgcctcccaactctgtgactctgtagccaagaaactggagggtaaagtcatgggtacc
ttcaccactgtggcctcaacagtaaaaggggccctgcaggactccctggtccagatccta
cagcccaagcggcgtgtggacatcctgagagacgtcctggaggctcggagccagcgcagg
cccttcgtcatcaccttctgtggggtcaacggggtcggcaagtccaccaacctggccaag
atctccttctggctgatcgagaacggtttcaccgtgctgatagcagcctgtgacacattc
cgtgcgggggccgtagagcagctgcgtacccaccagcgccgccttaactccctgcacccc
cctcaggatcacgggggacggcccgtagtgcagctttatgagaagggctacggaaaggac
gccgccggcatcgccatggaggctatcgcctatgcccgtaaccaggcctttgatgtggtg
ctggtggacactgctgggcggatgcaggacaacacccccctgatgacggccctggccaag
ctgatagctgtcaacatgcctgacctggtgctgtttgtgggggaggctctagtgggcaac
gaggctgtggaccagctggtgaaatttaaccaggcgctggctgatcactccatgtctgat
aagcctcgtctcatcgatgggatcgttctcaccaagtttgacaccattgatgacaaggtt
ggcgctgcaatctcaatgacctacatcacagggcagcccattgtgtttgtgggcacgggg
cagacctacaacgacctgcggagcctcaacgcccgcgctgtggtgggtgccctcatgaag
gcctga

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