Coregonus clupeaformis (lake whitefish): 121558458
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Entry
121558458 CDS
T08357
Name
(RefSeq) signal transducer and activator of transcription 5B isoform X1
KO
K11224
signal transducer and activator of transcription 5B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04012
ErbB signaling pathway
cclu04081
Hormone signaling
cclu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
121558458
09133 Signaling molecules and interaction
04081 Hormone signaling
121558458
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121558458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121558458
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
121558458
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GFIT
Motif
Pfam:
STAT_bind
STAT_alpha
STAT_int
STAT_linker
SH2
STATa_Ig
Motif
Other DBs
NCBI-GeneID:
121558458
NCBI-ProteinID:
XP_041727798
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Position
1:24512517..24554759
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AA seq
788 aa
AA seq
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MAVWIQAQQLQGDALHQMQSLYGQHFPIEVRHYLAQWIEGQLWDSVELENPQDELKAKRL
LDGLVQELQRKAEHQVGEDGFLLKIKLGHYASQLKSTYDRCPLELVRCIKHILHTEQRLV
QEATNAIGGGGGGGTMDSLSQRHQQINQTFEELRVATQETENELRKLQHNQEYFIIQYQE
NLRIQAQLSSLSAVPAEERAQRETSLQAKRATVEAWLTREANTLQKYRLDLAEKHQKTLG
QLRKQQTLILDEELIQWKRRQQLAGNGGPTEGGLDVLQSWCEKLADLIWQNRQQIRRAEH
LTQQLPLPGPMEELLTKLNSDITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGG
KLNVHMNPPQVKAVIVSEQQAKALLKNESTRNDSSGEILNNNCVMEYHRTTGTLSAHFRN
MSLKRIKRSDRRGAESVTEEKFTVMFESQFSVGGNELVFHVKTLSLPVVVIVHGSQDNNA
TATVLWDNAFAEPGRVPFIVPDKVLWPQLCEALDMKYKAEMHSARGLSDDNLVFLAQKAF
SSGSINPDDYRNMTMSWAQFNRESLPGRNFTFWQWFDGVMELMKKHLKPHWNDGAIMGFV
NKQQAQDMLMSKPNGTFLLRFSDSEIGGITIAWVAENPNKAGERLVWNLMPYTTKDFSIR
SLADRISDLNHLMFLYPDRPKDEVFSKYYTPPLSKAVDGYVKPQIKQVVPEFTTPNPEPS
SGNPTYMDQAPSPSVAHPNNFAIFPPIRSDPMMDADGEFDLEDTMDVARHVEELLRRPMA
NQWDGQQS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtggatccaagcccagcagctacagggggatgctctgcaccagatgcagtct
ctctacggacagcacttccccatagaggtgcgccactacctagcccagtggatcgagggg
cagctctgggactctgtggagctagagaacccccaggatgagctgaaggccaagcgtctg
ctggacggcctggtgcaggagctacagaggaaggccgagcaccaggtgggggaggacggc
ttcctgctcaagatcaaactgggacactacgccagccagctcaagagcacgtatgaccgc
tgtcctcttgagctggtgcgctgcatcaaacatatcctccacacggagcagaggctggtg
caggaggccaccaatgccatcgggggcggcgggggtggcgggaccatggacagcctgtcc
cagaggcaccagcagatcaaccagacgttcgaggagctgcgcgtggccacgcaggagacg
gagaacgagctgcgcaagctgcagcacaaccaggagtatttcatcattcagtaccaggag
aacctgcgcatccaggcccagttgagcagtctgtcggccgtgccggcggaagagcgagcc
cagagggagaccagcctgcaggccaagagagccaccgtggaggcttggctcaccagggag
gccaacacactgcagaaatacagactggacctggcggagaagcaccagaagactctgggc
cagctgaggaagcagcagacgctgatcctggatgaggagctgatccagtggaagagacga
cagcagctggctggcaacggggggcccactgaggggggactggatgtcttgcagtcctgg
tgtgagaagctggcggacctgatctggcagaaccggcagcagatccggcgggctgaacac
ctgacccagcagctgcctctgcctggcccaatggaggagctgctcaccaagctcaactct
gacatcaccgacatcatctccgccctcgtcaccagtacgtttataatagagaagcagccg
ccccaggtgctgaagacccagactaagtttgcggctactgtgcgcttactggtgggcggg
aagctcaacgtgcacatgaaccccccgcaggtcaaggcagtcatcgtcagcgagcagcag
gccaaggccctgctcaagaatgagagcacccgcaatgacagcagtggagaaattctcaac
aacaactgtgtgatggaataccaccggaccacaggaaccctcagtgcccacttcaggaac
atgtccctgaagcggatcaaacggtcggaccgtcgcggggctgagtcagtcacagaggag
aagttcacagtcatgtttgagtcccagttcagcgtggggggcaacgagctggtgttccat
gtcaagacattatctctccctgtggtggtgatagttcacggtagtcaagacaacaacgcc
acggcaacggtcctgtgggacaatgcttttgcagagccgggcagggtgccattcatagtg
cctgacaaggtgctgtggccccagctgtgtgaggccctggacatgaaatacaaggcagag
atgcacagtgcccgcggcctctccgacgacaacctggtcttcctggcccagaaggccttc
agcagcggcagcataaacccagacgactaccgcaacatgaccatgtcctgggcccagttc
aaccgggagagcttgcctgggaggaacttcaccttctggcagtggtttgatggagtcatg
gagctcatgaagaaacacctgaagccccactggaatgacggggcgatcatgggctttgtg
aacaaacagcaggcccaggacatgctgatgtccaagcccaacgggaccttcctgctccgc
ttcagtgactctgagatcgggggcatcaccatcgcctgggtggcagagaaccccaacaaa
gcaggggagaggctggtgtggaacctcatgccgtacacaaccaaagacttttccatccgc
tcactagccgaccgcatcagtgacctcaaccacctcatgttcctctatcccgaccggccc
aaggacgaggtcttctccaagtactacacccctcctctctcaaaagcagtggatggctac
gtcaaaccgcagatcaagcaggttgtgccagaattcactactcccaaccctgagccgtcc
agtgggaaccccacctacatggaccaggcaccctccccgtcagtagctcaccccaacaac
tttgcaattttccctcccatcagaagtgaccccatgatggacgcagatggagagtttgac
ctggaagacaccatggatgtggcccgacacgtggaggagctcctgcggcggcccatggcc
aaccagtgggacggccaacagtcctga
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