Coregonus clupeaformis (lake whitefish): 121558519
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Entry
121558519 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121558519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121558519
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121558519
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121558519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
PTN_MK_C
Motif
Other DBs
NCBI-GeneID:
121558519
NCBI-ProteinID:
XP_045073595
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTQHKVDVAASSTEMRLEIVNCKEKIRALSCGDSHAVLLSEEGRVLCLDKDNIPRPLDNL
CNRQVTQVACGDQHSISLTQDGQVFTWGQNTSGQLGLGWDEPSAMSPKPLKSLSGIPLVQ
ITAGGDHSFALSLSGAVFGWGKNTAGQLGLGDTTNRHAPAPVDCLNLKKTVLISCGGEHT
AVLTKGGVVFTFGSGRYGQLGHNSLRDELRPRVVGQLWGLKVTQIACGRHHTLAFVGPSN
EIYSFGRGEQGQLGNGVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFALCTLGQESEE
RSNNLRSSVGKVTQQALDEEIIDKWISECDSKSWKKVQKEIKKMFSSASCLNGSFLDKSC
DKHYQTSPKQSGLDLSLVQGAFRKLAKKDKVLTEVEAVVQHTLLPSLYEEPIGVESLRVY
LVLPELLRVLHKRHRRTDLTEALAAAILRLHPDKLQVLGDCWSSLKPSVMTKHIGMWKKA
LSVILTSEHILRTRDHGVKHLLHVLGHLHRANQKSGETQTVPDSTFCMEEVHFNPIFLAE
DVKLWRLWSKQDVDQTPAIFCHYPFLMNLQSKIIVFNINAALTQNPPNNRQRTGMWPFNM
LPVAAPAVFFELRLKRASLIEDTFQQLSVERPSTSKRPLVVYFDEDAKLTDVYKRDFFIH
LFDKLFVPESGMFMYNDNKTLAWFPAKPRVEEKRYFLFGVLCGMALYNNNMVHLPFPMAF
FKKLVNINPSLEDLREFSPIEAGSLQYILDYPDDDVENMDITFSVVWDDVAVELDPKEIG
KLVTSANKKEFVDTYVNYIFNQSVEKVFEEFRKGFFKVCDMDVVEFFQPEELRGVMVGKE
NFDWETLKQNTVYEGEYHAGHPNIVTFWEVFEELTEDQKKAFLLFLTGCDRVPILGMNQI
RMRVQILLNSSEKHFPEALTCHSLLQLPIYPSKETLQSRLIEAVGHNRGFWNE
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcataaagtagacgtagcagccagttccactgaaatgcgtctagagattgtg
aactgtaaggagaagattcgggctctgagttgtggagattctcatgcggttttactgtct
gaagagggccgggttctctgcttggacaaagacaatattcccagaccattggataaccta
tgtaaccgacaggtaactcaggttgcatgtggagaccagcattcaatttcactaacacag
gacggtcaggtgttcacgtggggtcagaacaccagcggtcagttgggtttggggtgggac
gagcccagcgccatgtcccccaagcccctgaagtctctatcagggatccccctggttcag
atcactgcggggggagaccacagcttcgctctgtccctttctggagctgtgttcggctgg
ggcaagaacaccgccgggcaactgggactaggggacacaacaaacagacatgctccagct
cctgttgattgcctgaatctgaagaagactgttttaatttcatgtggaggagaacatact
gccgttctgacaaagggaggtgtggtgttcacatttggctcaggccgctatggacagctt
ggacacaactctctccgagatgaactacgacctagagtggtggggcaactctgggggtta
aaggtgacccagatagcctgtggaagacaccacacattagcatttgtggggccatctaat
gagatctactcatttgggcgcggagagcaagggcagctgggaaatggagtaaagattgat
cagtctgtgcccctcccagtacaactgccagaccagattgatgaccagaaaattgaacac
atttttgctggaggaaaccattcctttgcattgtgcactcttggtcaggagtctgaagaa
aggtcaaacaatctcaggtcaagtgtgggcaaagtgacacaacaagcattagatgaagaa
atcattgacaaatggatctcagaatgtgattcaaaatcatggaaaaaagtacagaaggaa
atcaaaaaaatgttttcttctgcgtcatgtttaaatgggagctttcttgataaaagttgt
gacaaacattaccaaacctcaccaaaacagtctggcctggatttgtcactcgtccaaggc
gcattccggaagctggcaaaaaaggacaaagttttgactgaggttgaagctgttgtccag
cacacattacttccctccctgtatgaggagccgattggagtggagagcttgagggtctac
ctggttctccctgagctcctgagggtccttcacaaacggcacagaaggacagatctcact
gaagcccttgctgccgctatcctcagactgcaccccgacaagctgcaggtccttggtgac
tgctggtcctcattgaagccctctgtcatgaccaagcacattgggatgtggaagaaggcc
ctgtcggtgattctgacaagtgaacatattctacgcacccgtgaccatggggtcaaacac
ctgctccatgtcctcggccatctccacagagcaaaccaaaaatctggagagacccagaca
gttccagacagtaccttttgtatggaggaggttcacttcaatcccatatttctagcggag
gatgtaaagctttggcgtttatggtcaaagcaggatgtggatcagacacctgccatcttt
tgtcattacccattcttgatgaatctgcagagcaagataattgtttttaacatcaacgcc
gcactcacacagaatccccctaacaatcgccaaaggactggcatgtggccttttaacatg
ttacccgtggcggcccctgctgtgttctttgagctgaggctgaagcgagcatcactcatc
gaagacactttccaacaactgagtgtagaaagacccagtacctcaaagaggccccttgtg
gtgtatttcgacgaggatgcgaagctaacagacgtctacaaaagggacttcttcatccat
ttgtttgataagctgtttgtacccgagtctgggatgttcatgtacaacgacaacaagacg
ctagcctggttccctgcaaagcctagagtggaggagaagcgttatttcctgtttggggtt
ctgtgtgggatggccctgtacaacaacaacatggtgcacctccccttccccatggccttc
ttcaagaagctggtgaacatcaatccctctttagaggacctgagagagtttagccccatt
gaagcagggagtttgcagtacatcttggattaccctgatgatgatgtcgaaaacatggac
attactttctcagtggtatgggatgacgtagcggtggaacttgatcccaaagaaattgga
aaactcgtcacaagtgctaacaagaaggagtttgtagacacatacgtgaactacatcttc
aaccagtcagtagagaaggtgtttgaagagttcaggaaaggcttcttcaaggtgtgtgac
atggacgtggtggagttcttccagccagaggaactgaggggggtgatggtggggaaggag
aacttcgactgggaaacgctgaaacagaacactgtgtatgaaggagagtaccatgctgga
catcccaacatcgtcacattctgggaggtgtttgaggaactgacagaggatcaaaagaaa
gctttcctgctgttcctgactggctgtgaccgtgtgcccatcctgggtatgaaccagatc
aggatgagggtccaaatccttctcaactcctccgaaaagcatttcccagaggcgctgaca
tgtcactctctgttgcagctgcccatatacccctccaaagaaacactacagagcaggctt
atagaagcagtcggccacaacagaggcttctggaatgaataa
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