Coregonus clupeaformis (lake whitefish): 121558576
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Entry
121558576 CDS
T08357
Symbol
mcf2la
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121558576 (mcf2la)
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121558576 (mcf2la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
hSH3
SH3_2
CRAL_TRIO
PH_10
Spectrin
UreE_C
Motif
Other DBs
NCBI-GeneID:
121558576
NCBI-ProteinID:
XP_045061565
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All DBs
Position
20:complement(61379302..61420420)
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AA seq
1217 aa
AA seq
DB search
MALNRVSLLCHDITRMWLQLNLITNDIMQQESDRLFAADIDPDLRKQFAFLSGGRGENGS
PIIVFPDFPAFGELQEEEFHNVLTYLTSVPSVTASGVGFILVIDRRQDRWTAVKGTLLRI
AGSFPGNLQLVLVLRPSTLFQRTLSDIFFKFNRDEFKMKVPVVMLSSVTELHAYIDRTQL
PQELGGTQDYCHDTWISHRTAIEAFALMVKTTAQTLQSFGTELAETELPNDAQATSNLLA
THTEKKGQMKEDLCVALGQGGRLLESINEPLQREPDYTMNQDELENLATVQRLLGQLDET
ETAFDDFWERHQTKLEQCLQLRHFEHYFREVRAQLDVVSERVARLSEVGISPAHAEHILR
ELNSQEEKACDVLDRALSLAAEGDGLIDSAHYAEDSILPKCSELRAVCDEVTSFLKTKKV
LLLRAMELHHCLEKASRWCEEGIYLLASQPVDRCQSQDGAEVALQELEKYLDTAAQHQIT
DLDAIRRDYDSILNPELREQVEKVFQKQVSMQEMFEKRRVSLKKLAAKQTRPVQPVAPRP
EAIIKSPMSSPAHRSQEKKNAEDNILNVENCRIVEVQVQNCGSRHGSLSEEEENLAVLRR
HVMNELLETERAYVEELLCVLQGYAAEMDNPAMAHLLPSALLNRKDVLFGNMPEIYQFHK
RTFLRELETYTDVPELVGRCFLERMGDLQIYEKYCQNKPRSESLWRQCSDCTFFQECQRK
LEHKLGLDSYLLKPVQRITKYQLILKELLKYSKGCEGSEDLQEALSSILGILKAVNDSMH
LIAITGYEGSLTELGRLLMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFLHEKALLFCK
RREENGEGYEKAPSYSFKHSLNMSAVGITESAKGDNKKFEIWCNSREEVFIVQAATPEIK
TSWLKEIRKVLTGQLKACRESSQKKASDTMSPSPTSNSPSVCLSPFRNCQKSVKKGDEKK
TDAVNSDPNSPSSPKHKEGTVTSPTTDRVSVAKKRFTLQGFSNLKSQKEFLHPAGKSLTL
PMVFSRPGSPLSPDHKAKRHEIKSDPTPFGCKEPGQTPHITLSRAKWLSTSSLLQAKRRG
WNKASLSMDAPEELDGYSSAEDPMNSDPEDEGGRKLAVGDRFTVVADYEKEKGGPQDLSV
KSGDMVQLIKEGDDGQWFVRNLGSNKDGWVAVANLLTLITESKSSQSLCSSEGSVTANLS
TSSSCSETYTSFSDIKP
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggccctcaaccgagtgtccctgctctgccatgacatcaccaggatgtggctgcaactc
aacttgataacaaatgacatcatgcagcaggagagtgatcgtctgttcgctgcagacatc
gatcctgacctcaggaaacagtttgccttcctctcagggggccgaggggagaacggcagt
cctatcatcgtgttcccagacttccctgcgttcggcgagctccaggaggaggagttccac
aacgtgctgacctacctgaccagtgtgcccagtgtgacagcgtctggagtgggcttcatc
ctggtcatcgaccgccgtcaggacagatggaccgccgtcaaggggaccctgctacgcatt
gcaggctcattcccagggaatttacagctggttctggtcttgcggccctccaccttattc
cagcggacgctctccgacatcttcttcaagttcaacagggatgagttcaagatgaaggtg
ccggtggtgatgctgagctctgtgacggagctccatgcctacatcgaccggactcagctg
ccccaggagctgggaggaacccaggattactgccatgatacctggatctcacaccgcacc
gctatcgaggcctttgctctgatggtgaagaccacggctcagaccctgcagtcgtttggg
acggagctagctgagactgagctacccaacgacgcccaggccacctccaacctgctggcc
acacacaccgagaagaagggacagatgaaggaggacctgtgtgtggccctgggccagggg
ggccgactcctggagagcatcaacgagcccctgcagagagaacccgactatacaatgaac
caggacgagctggagaacctggccaccgtgcagagactgctgggccagctggatgagaca
gagacagcgtttgatgatttctgggagagacaccagaccaagctggaacagtgtctgcag
ctccgccattttgaacactacttccgtgaggtgcgtgcccagctggatgtggtatcagag
cgggtagcgcggctctctgaggttggcatcagtcccgcccacgcagaacacatcctacga
gaactcaacagccaggaggagaaagcctgcgatgtgttggaccgggccctgtccctggcc
gctgagggagatgggctgatagacagtgctcactacgctgaggactccatcctgcctaag
tgcagtgagctgagggccgtgtgtgatgaggtcacctccttcctcaagaccaagaaggtc
ctcctcctcagggccatggagctgcaccactgtctggagaaggcatcgaggtggtgtgag
gaggggatctacctccttgcctctcagccggtagataggtgtcagtctcaggacggggcg
gaggtggcgttgcaggagctggagaagtacctggacacggccgcccaacaccagatcacc
gacctcgacgccatcaggagggactacgactccatcctcaacccagagctcagggagcag
gtagagaaagtgttccagaagcaggtgtccatgcaagagatgtttgagaagaggagggtc
agtctgaagaagctggcagccaaacagacacggcccgtccagccagtggctcccaggcct
gaagccatcatcaagtcccccatgtcctcccctgctcacaggagtcaagagaagaagaat
gccgaggacaacatcttgaacgtagaaaactgcagaatagtggaggtccaggtgcagaac
tgcggcagcagacacggctctctgtctgaggaggaggagaacctggctgtgctccgacga
catgtaatgaacgagctgttggagactgagagggcgtatgtagaggagctactctgtgta
ctgcagggttatgctgcagagatggacaacccagccatggcccatctcctccccagtgcg
ctgctcaacaggaaggatgtcctgtttggcaacatgccagagatctaccagttccacaag
aggacgttcctcagggagctagagacctacacagacgtccctgagctggtaggacggtgc
ttcctggagaggatgggcgacctgcagatctatgagaagtactgtcagaacaaacctcgc
tctgagagcttgtggagacagtgctccgactgcaccttcttccaggagtgccagagaaag
ttggaacacaaactggggttggactcgtacctcctcaagccagtccagaggataaccaag
taccagctgatactgaaggagctactgaagtacagtaagggctgtgaggggtcagaggac
ctacaggaggcgctgtcctccatcctggggatcctgaaggccgtcaacgactccatgcac
ctcatcgccatcacaggatatgagggtagcctgacggagctgggcaggctattgatgcag
gggtcattcagcgtgtggacggaacacaagaaaggtcacgccaaggtcaaggacctggcc
cgcttcaagcccatgcagagacacctgttcctgcatgaaaaagccttgctcttctgtaag
agacgggaggagaacggggagggttacgagaaagccccgtcctacagcttcaaacactcc
ctcaacatgagtgcggtgggcatcacagagagcgccaagggtgacaacaagaagtttgag
atctggtgtaattccagagaggaggtgtttatcgtccaagctgcgacacctgagatcaaa
acatcttggttgaaggagatcaggaaggttctgactggccagctgaaagcctgcagggaa
tccagtcaaaagaaggcatcagacacaatgtctcccagtccaaccagcaacagcccatct
gtctgcctcagtccatttagaaactgtcagaagagtgtgaagaagggagacgagaagaag
acagatgctgtcaactctgaccccaactccccctcctccccaaaacacaaagaggggaca
gtcaccagtcccaccactgacagggtatcagtggctaaaaagcgttttacccttcaaggc
ttcagcaatctgaagagtcagaaagaatttctgcaccctgctggtaaaagtctaacatta
ccaatggtattctctcgaccaggatccccccttagccctgaccataaagccaaacgccac
gagattaagagtgacccaactccctttgggtgtaaagagcctggtcagactcctcacatc
actctgagcagggccaagtggctcagcacctctagtctcttacaggccaagaggagaggt
tggaacaaggcctctctctccatggacgcgccagaagagcttgatgggtactccagcgcc
gaggaccccatgaactctgaccctgaggatgagggaggcaggaagctggctgtcggcgac
aggttcacggtggtggcggactatgagaaggagaaaggagggcctcaggacctgtcagtg
aagagtggagacatggtgcagctcattaaagagggagatgacggacagtggtttgttaga
aacctggggagcaacaaagatggctgggtagcagtagccaaccttctcaccctcatcaca
gagtccaagtcctcgcagtccctctgcagctcagagggcagtgtaactgccaacctcagc
acctcctccagctgcagtgaaacctacacaagtttctctgacatcaagccttaa
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integrated database retrieval system
