Coregonus clupeaformis (lake whitefish): 121558603
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Entry
121558603 CDS
T08357
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121558603
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121558603
04081 Hormone signaling
121558603
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121558603
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
121558603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
121558603
NCBI-ProteinID:
XP_041727925
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MENVTSIPDNQTLGPWTDYSMEYKVVSILFVILICGIGIVGNVMVILVVLTTKHMRTPTN
CYLVSLAVADLMVLTAAGLPNITESLYGGGWVYGYVGCLSITYFQYLGINASSCSITAFT
IERYIAICHPIKAQFMCTLSRAKKIIVVVWAFTSLYCVMWIYLSDMNELIYDNITMFSCE
YKVSRNLYLPIYFTDFAVFYVVPLMLATVLYGFIARILFLNPLPADPKENTKKWKKESCQ
GNRTMSTNNSSFSTTARSRRQVTKMLAVVVVLFALLWMPYRTLVVVNSFLDKAYLDLWFL
LFCRICIYLNSAVNPVIYNAMSQKFRTSFKKLCHCGPQRLEKPASYSVALTYSVIKDTTN
GESPDHFTTEMDELATPTPSDQFLPSTKRMSFEDPSLSGRVALSTP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgttacttcaattccagataaccagacacttggtccatggactgattatagc
atggaatacaaagtggtcagcatattatttgtgatcctcatctgtgggatcggaatagtt
ggaaacgttatggtgatactagttgttcttacaaccaaacacatgcggacacccaccaac
tgttacctggtgagtttggcggtggccgacctgatggtcctgaccgcggcgggactgccg
aatattacagagagtttgtatggaggaggctgggtgtacggatacgtcgggtgccttagc
attacttatttccagtacttgggcatcaacgcgtcttcatgttccatcaccgctttcacc
attgagcggtacatagccatctgccaccccataaaagcgcagtttatgtgcactctgtca
agagcaaagaaaatcatagtggtcgtttgggcttttacctcgctctactgcgtcatgtgg
atttatctctctgacatgaacgagttgatttatgacaatattaccatgttctcatgcgaa
tacaaagtgtccagaaatctttacctgccaatctacttcactgactttgccgtgttctat
gtggtgcccctcatgctagccactgttctgtatggatttatcgctagaattcttttcctc
aaccccttgccagcagaccccaaggaaaatactaaaaagtggaaaaaagaatcatgccaa
ggaaataggacgatgagcaccaacaattcatcatttagcacaactgcccgctctcgcagg
caggtgactaagatgttagctgtggtggtggtgctctttgccctcctctggatgccctat
cggacgctggtggtggtcaactccttcctggacaaggcttacctggacctctggttcctg
ctcttctgccgcatctgcatctacctgaacagcgctgtcaaccctgtcatctacaacgcc
atgtctcagaagtttcgcacctccttcaagaagttgtgtcactgcggtccgcagcgattg
gagaagccagcgtcctacagcgtggccctgacctacagcgtcatcaaggacacgaccaat
ggagagagccctgaccacttcactactgagatggacgagctggccacgcccacacccagt
gaccagttcctgcccagcaccaagaggatgtcattcgaggacccctctctgtcaggcagg
gttgcccttagcactccctga
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