Coregonus clupeaformis (lake whitefish): 121558677
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Entry
121558677 CDS
T08357
Name
(RefSeq) gamma-sarcoglycan
KO
K12564
gamma-sarcoglycan
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121558677
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_1
DUF2345
Motif
Other DBs
NCBI-GeneID:
121558677
NCBI-ProteinID:
XP_041728013
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Position
5:4072084..4087200
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AA seq
289 aa
AA seq
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MVREQYVTTTQDSSVPAPVPDSIYKIGIYGWRKRCLYLFVLLLIIILTVNFALTIWILRV
MWFNTEGMGHLKVTSDGVRLEDGESEFLFPLYAQEIHSREDSSLLVNSSENVTLNARNEN
NDVTGSLSVGPDVAQGNAQNFVISSNTKTLFSADDKEVVVGTDKLRVTGPEGALFEHSVE
TPLLKAEPFKDLRLESPTRSLSMDAPKGVFVKALAGNIEAASNMDVLLHSSEGLVILDAE
TVRLPNLPLGQGGVSGNTQGLYEVCVCPSGKLFLSKAAVTSTCSESQEC
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggtgagggagcagtatgtcacaaccacccaggacagcagtgtccctgcccctgtccct
gactccatctataagatcgggatctacggttggaggaagcgctgcctctacctgtttgtc
ctgctgctcatcatcatcctcaccgtgaactttgccctcaccatatggatcctccgggtc
atgtggtttaacacagaagggatgggacacctaaaagtaacatcggacggagtgaggctt
gaggatggcgagtcagagttcctctttcctctctacgcccaagagatccactccagagag
gactcctctctcctagtgaactcgtcagaaaacgtcaccctcaatgcccgcaatgaaaat
aatgatgtcacaggaagtctctccgtaggtccagatgtggcccagggaaatgcacagaac
tttgtcatcagctccaacaccaagacgctgttttctgcagatgacaaagaggtggttgtt
gggacagacaagctccgtgtcacaggtccagaaggtgccttgtttgaacactctgtagag
acgcccctgctcaaagctgagcccttcaaagacttgaggctggagtctccaacccgctct
ctcagcatggatgcaccaaagggagtctttgtcaaagcactggccgggaacatcgaggct
gcatctaacatggatgttctattgcactccagtgaaggactggtgattctggatgccgag
acggtgcgtctgcctaatctccccctgggacaaggaggggtgtctggaaacactcaggga
ctctacgaagtgtgtgtttgtcccagcggaaagctgttcctgtccaaggccgcggtcacc
tccacgtgcagcgaaagccaagagtgctag
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