Coregonus clupeaformis (lake whitefish): 121558839
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Entry
121558839 CDS
T08357
Name
(RefSeq) cysteine--tRNA ligase, mitochondrial-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121558839
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121558839
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121558839
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
121558839
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121558839
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121558839
Prokaryotic type
121558839
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
DALR_2
CysS_C
Motif
Other DBs
NCBI-GeneID:
121558839
NCBI-ProteinID:
XP_045066029
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Position
33:complement(396961..411641)
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AA seq
574 aa
AA seq
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MWPSITICRPLLLKLRSGYAFSKDTQLTLVSPSKLIFRPSASCSGVGKKWTRPTGYDTGL
KTYNSLTKQKEPLVLAQEGIATWYSCGPTVYDHAHLGHACSYVRFDIIQRVLSRVFGINV
IHVMVITDIDDKIIRRALEKSISPTVLARMYEEEFKNDMLALKVLPPAVYLRVTENIPQI
VAFIEGIIRNEHAYATKQGDVYFDIRSIGDRYGKLMGAGDVAGEPGDTEKRDSRDFALWK
ASKPQEPSWESPWGKGRPGWHIECSTIASSVFGSQLDIHSGGIDLAFPHHENEIAQCEAY
HQCGQWGNYFLHSGHLHLKGSAEKMSKSLNNYITIKDFLESYSANEFRMFCLLTKYRSAI
DYSDASLNEGRSSLATITAFTHDAQAYMRGQLQCQAVQEGALWERLAETKANVVRALADD
FDTPRVVNAIMSLVYYGNCHLQPITKPDGSPRTPAVFGAILAYIRETFEVLGVDLLDRKE
AHSVDSSGTLENVVEQLARFRSDVRAFALSVEDTPPGEPVPASQRPRSERLPLLKACDTL
RKDLAPLGVHIRDRGPNSTWEISQKRSAGQDKEK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccagcataacaatatgtaggccgcttctattgaaattaagaagcgggtatgct
ttctccaaggacactcagctaacgttagtgtcaccaagcaaactgatctttagacccagt
gcatcatgttcaggggtggggaagaaatggactcgaccaacaggatacgacacggggttg
aagacctacaacagcctcaccaaacagaaagaaccactggtattggctcaggaaggaatt
gctacttggtatagctgtggacccactgtctatgaccatgctcacctggggcatgcatgc
tcctatgtcagatttgacatcatccagagggttctatccagggtctttggcatcaatgtc
atccatgtcatggtcatcactgacatcgatgataaaatcatcagaagagctttggagaaa
agcatatctcctacagtcctggccagaatgtacgaggaggaatttaaaaatgacatgtta
gccctgaaggttcttcctcctgcagtgtacttgagggtcactgagaatatacctcaaatc
gtggctttcatcgagggcatcatcagaaatgaacacgcctatgccacaaaacaaggggac
gtgtatttcgatatcaggtccatcggggaccgttacggcaaacttatgggtgctggagat
gtagctggtgagcctggggacacagagaaacgggacagcagggattttgccctgtggaag
gcatccaagccgcaggagccctcctgggagtctccctggggcaagggaagacccggctgg
cacatcgaatgctccaccattgccagctctgtgtttggaagtcagctggacattcactct
gggggcatcgatctggccttccctcaccatgagaatgagatcgcccagtgtgaggcctac
caccagtgtggccagtgggggaactacttcctgcactcaggacatttacatctaaaagga
agtgctgagaaaatgtcaaagtccttgaataattatataacgataaaggatttcctagaa
tcttactccgccaatgaattccggatgttctgcctactgaccaaatacagatcagcaatc
gactacagtgacgccagcttgaacgaaggccggagctccctggcaaccattactgccttc
actcatgatgcccaggcttacatgaggggccagctacagtgccaggctgtgcaggagggg
gcgctatgggaaaggttagctgaaaccaaagcaaacgtcgtcagagcactggcagatgac
tttgatacgccgagggtcgtcaatgccatcatgagccttgtttactatgggaactgccat
cttcagccaatcactaagcctgacggatcaccaaggaccccagctgtgtttggggccatc
ctcgcctacatcagggaaacctttgaggtcctgggggtcgacctgctagacagaaaggag
gctcattctgtagattcttcggggaccctagagaacgtggtggagcagttggctcgtttc
cgtagcgacgtgcgggccttcgctttgtccgtggaagacacgccccctggagagcctgtc
cctgccagtcaaagaccacgctcagaaaggttacccctcctcaaggcctgcgacaccctg
cggaaagaccttgcacctttgggagtgcacataagggacagaggccccaactccacgtgg
gagatttctcagaagaggtcagctggccaggacaaggaaaagtag
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