Coregonus clupeaformis (lake whitefish): 121558875
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Entry
121558875 CDS
T08357
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
cclu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121558875
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121558875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121558875
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121558875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
RhoGAP
Motif
Other DBs
NCBI-GeneID:
121558875
NCBI-ProteinID:
XP_045074678
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MSWYLSRGIYRVNGAKSRVEKLCQAFENGKDLVELSDLSPHDIGNVLKLYLRQLPEPLIL
YRYYNDFIGLAKESQAVIIEEKAAARALQNQTKSQGQPGGEQPRPGGTQPAVEGEQPPLR
TSQPGGELPNQPSIKLNRVLFKIRDLLRQLPPAHYRTLRFLTAHLHRVTEQAGENKMTAS
NLGIIFGPTLVKPRQTDAEVSLSSLVDYPYQALMVELLVRHFQMIFDVASPVSSSSSSSS
SPTTTSTAGHTSPRLTPQEEQRLSRQSTSLLDIKESAKVYKRHLSSNILDEVRGVTTGRT
GPDRTGPDRTGPDRTGPDRTGPDRTGPDRTGPDRRELTALERLSGVGSAAAGAPKRSTLV
FGRPSINLSSSTSSFSSMAPRVQQRSRRVSRPISMPLERLPLPNPSQVVERNSQNTNDAA
MLDPTADTIMELAEPEKEKPRIGGGSRAPLRRQIKAKPAGAQPCGVTSATARRILQSLER
MSSPLADAKRIPSTVSSPLSTSLDGSTLDRSHFQAQKKRLDSPLPPVQRLVIPASASVSG
NRSMSFRPSLIPGCLTRTPRDTPTRQSPLIPEAVAGPSQSTSSSLPTYPLSSTPAARSTG
SGGGKMKRERTSTRPSSKRPEDEIAELPALPAISLLINTSISLPSFSFSTTKPTATVTST
PVLEEPVTNEVPLTTAPSTPPSTPFTFSSPIVMTTATSPPSFSPSSGFTFSAPVVKTGLS
LSNGKMATPVVAAVKHAASESMEEIEGPFKPAKVLKQGSVLDLLKGPGFAVPVTQTSPVP
KAPQETPALSTAPSLGDLFKVPTGSWDCDVCMVQNKPTDTKCVACVTPRPNSSLAKTHSK
PFATVSGLEGSTTTTTTTAAGFGALFTKPAGSWDCDTCLVQNKPQVVKCVACETAKPGTG
VKATLTLPAFSEAKTLPAAAPLLGFGDKFKKPEGAWECDVCMVQNKVQDIKCVSCMSTKP
ANEKREQPGATAAPPSLTPAPVSTTPLLGFGAQFKKPEGAWECDVCCVQNKGADQACVAC
QTHKPGVKVEPKAFGSSSFGIQSLSDTGSGGFKFGLGASSDSASASGGFKFGGTLSDSSS
SGGFKFGGTLSEFEAP
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggtatctgtccaggggaatctaccgtgtgaacggggccaagtctcgcgtggag
aagctgtgccaggcgtttgagaatggcaaggacctggttgagctctctgacctctcaccc
cacgacatcggcaacgtgctcaaactctacctgagacagttaccagagccactgatcctg
taccgttactataatgatttcatcgggctggccaaggagagccaggcggtgatcatagag
gagaaggctgcagccagggccctccagaaccagaccaagagccaggggcagccaggggga
gaacaaccccgaccaggaggcacccagcctgcggtagagggagagcagcctcccctgaga
accagccagcctggaggagagctccccaaccagcccagtatcaaactcaacagagtcctg
tttaagattagagacctgttacgacagctgcctcctgcacactacaggaccctacgcttc
ctcacagcacacctacacagagtgacagagcaggcaggggagaacaagatgacagccagt
aacctgggcattatcttcggccctacgctggtcaaaccacgacagactgatgcagaggtc
tccctgtcctctctggttgattacccttaccaggcactgatggtggagttgctggtacgt
cacttccagatgatctttgacgtggccagccccgtctcctcctcctcctcctcctcctcc
tcacctaccaccacctccacggcgggccatacctccccccgactcacccctcaggaggag
cagagactcagccgccagtccacctccctgcttgacatcaaggagagcgccaaagtctac
aagaggcacttgtcctctaatatcctggatgaggtgagaggggtgacgacaggaaggaca
ggaccggacaggacaggaccagacaggacaggaccagacaggacaggaccagacaggaca
ggaccggacaggacaggaccagacaggacaggaccagacaggagagagttaacagccctg
gagagactcagtggtgtcggctctgctgctgctggcgctcccaagaggtctacacttgtg
tttggacgtcccagcatcaacctctcctcctctacctcctccttctcctctatggcccct
cgggtccaacagcgctctagaagggtgtcccgaccaatcagcatgcccttggagcgcctg
cccctccccaacccctcccaggtcgttgagaggaacagccagaacaccaacgacgccgcc
atgttagatcccactgctgacaccatcatggagttggccgagccggagaaggagaagcct
cggattggtggggggtcaagggctccattgcggagacagatcaaggctaagcctgctggg
gctcagccctgtggggtgaccagcgctaccgcccgacgcatcctacagtccctggagcgc
atgtccagccccctcgctgatgccaagagaatcccctctacagtgtcctctcccttgtca
acatccctggatggcagcactctagaccgttcacatttccaggcccaaaaaaaacggctg
gactctcccctcccaccagtccagaggctggtgatcccagcatcagcgtcggtgtctggg
aaccgctcaatgtccttcaggccctctctgatccccgggtgcctaacccgaacccccaga
gacacgcccacaagacaatcccctctgattcctgaagcagtggcaggtccttctcaaagc
acaagcagcagtctgcccacctaccctctgtccagcactcctgcagccagaagcacaggg
tcaggaggagggaagatgaagagggagaggaccagcacacgaccctcgtccaaacgacct
gaagacgagattgctgagctaccggccctgccggccatctctctacttatcaacacctcc
atcagtctgcccagctttagcttctccaccaccaagcccactgccactgtcacctccact
cctgtcctggaggagcccgtcactaacgaggtgccactgactacagccccctctacccct
ccctccacacctttcaccttctcctcccctattgtcatgacaactgctactagcccaccg
tccttctccccatcttctgggtttacattcagtgcacctgtagtgaaaacgggtctgtca
ctatccaacgggaagatggccaccccagtagtggcagcagtgaagcacgctgccagtgag
agcatggaggagatagaagggccgtttaaaccagccaaggtgttgaaacagggcagtgtg
ctggacctcctcaaaggacctgggtttgccgttcctgttactcagacctcccctgtcccc
aaagccccccaggagaccccagccctgtccaccgccccctcccttggggacttgttcaaa
gtgccaacagggtcctgggactgtgatgtctgcatggtgcagaacaaacccactgacaca
aagtgtgtggcctgtgtgaccccacgaccaaactcttctttagcaaagacccacagtaaa
cccttcgcaacggtgtccgggctggagggttccaccaccaccaccaccactactgctgct
ggttttggagccctgttcacaaagcctgcgggaagctgggactgtgacacttgtctggtt
cagaacaagcctcaagtggtcaaatgtgtggcctgtgagacagccaagcctgggactgga
gttaaggccacactgactctgcctgccttctcggaggctaagactctgcccgctgctgcc
cccctcctgggcttcggggacaagtttaagaagccggagggtgcgtgggagtgtgacgtg
tgcatggtgcagaacaaggtgcaggacatcaagtgtgtttcctgtatgagcactaagcca
gctaatgagaagagagaacaacctggagcgacggcagcgcctccatctctaactcccgcc
cctgtcagcaccactcctctactgggctttggggcccagttcaagaagccagagggagcg
tgggagtgtgacgtgtgctgtgttcagaacaagggagcagaccaggcatgtgtggcctgt
cagacccacaagcctggggttaaagtagagcccaaagcgttcggttcctcgtcgtttggt
atccagtccttgtctgacaccggctcagggggtttcaagtttggcttgggggcgtcatcg
gactcagcctctgcttctgggggctttaaattcggcggcaccctctctgactcctcgtct
tcagggggctttaaattcggcggcaccctctctgaatttgaagccccctga
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