Coregonus clupeaformis (lake whitefish): 121558905
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Entry
121558905 CDS
T08357
Symbol
sltm
Name
(RefSeq) SAFB-like transcription modulator
KO
K25093
SAFB-like transcription modulator
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121558905 (sltm)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
RRM domain-containing proteins
121558905 (sltm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
121558905
NCBI-ProteinID:
XP_045074322
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MASGAISMESKRITDLRVIDLKSELKRRNLDVAGVKNVLIARLKQAIEEEGGDPETIEIP
LPADTPTRKNANAKTKGKKVDSDTDNPMEDESFSKEDESFSKEEESPTKEEESPTKEEES
PTKEEESPTKEEESPTKEEESPTKEEDTQTKAEDATTKEEESATKKDEAFSKEDQSLSKE
GDEDDVEKDVTDTDDGTRENSKPPPSEDGLPEAEIEAEAEAEAEQVEEIETEVAVSAKED
EDDNISVTLQNEDAITLDVDGDDLLETGKHVKLPDSEADKGCDDPEASAKTSPKDAMKME
VEGHKDGKKDDGTKVDSSKKESREASKKAEMGDKDKDSGKKGPSSTGASGQGKSSSKDRD
GKATKDDKGSISSSSASSSTRNIWVSGLSSNTKAADLKNLFGKYGKVFSAKVVTNARSPG
AKCYGLVTMSSSAEVGRCISHLDRTELHSQQISVERVKSDPFKKEPSKKEADDRTSSSKS
SSDKRSAFVSTSKTSTSKTQPSSKKEEKKSDKPSDKDGKDSSKKQESKSTTSSSGPDASK
KDDKKHGGRTKSPGKMVVIDHAKGDLNKVRPPFRRGRFDKPGFTNNNMMQRRPRYFMPPE
EMEMNRGSVFPNKGGSKDILPFHLIKEQRLRVRMVRLERVRRTMELRRRREIAERERRER
ERISLIREREERENLLRERQRLEMERQKLERERMERERLERERIRIEQERRKEAERMARE
REELRRQQEQLRYEQEKRNNLKRGRDVDHSRRDDPYWNGNKKIQTESEGRLNQGSDYNRQ
QNRFTEFSPRERGRGFPEAAAAEPNTIERRNRFNSEPEAKKARPAARRDSSGFERYPKNF
ETVRRAEPPPTPRADIRDTDRRAIRDRDERRAVPMTERRAVPMTERRAVPMTERPAGGRA
PMPGMSHTGRSPRGTGHAGHATHTGHAGWKNDGGMSAPKGDIRGAVRTGGMRPERSGRDG
QGPALRGGSTASRGRSNFSGRDGGRPMVIADQHFSSGRQVVVERHGRDQPAPRKEWHGGA
GSQGGGFPDSRRMGDSRGSMMAPHASHSSSAMNRIVQITNSSMSSVGGFKPFKGAPRRF
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggtgccatttcaatggagtcaaagagaataacagatttacgagttatagat
ctcaaatctgaactcaagcgaaggaatttagatgtcgctggtgtgaagaatgttctaatt
gccagactgaaacaggccattgaggaggaaggtggagatccagagaccattgaaattcca
ctcccagcagacacgcctactagaaaaaatgcaaatgcaaaaaccaaaggaaagaaagtg
gactctgacactgacaatccaatggaagatgagtccttctccaaggaagatgagtccttc
tcaaaggaagaagaatctcctaccaaggaagaagaatctcctaccaaggaagaagaatct
cctaccaaggaagaagaatctcctaccaaggaagaagaatctcctaccaaggaagaagaa
tctcctaccaaggaagaagacactcaaaccaaggcagaggacgctaccaccaaggaagag
gaatctgctactaagaaagatgaagctttttccaaggaagaccaatctctttccaaggag
ggcgacgaggatgacgttgaaaaagatgtaactgatacagatgatggtactcgcgaaaat
tctaaacctccacccagtgaggacggcctcccagaggccgagattgaggcagaagccgag
gcggaggccgaacaagtggaggagatcgaaactgaagttgccgtctccgctaaagaagac
gaggacgataacatatccgtcacactccagaatgaagatgcgatcacgctggatgttgat
ggcgatgacctcctggaaacaggtaaacatgtgaaacttccagattcagaggcagacaag
ggctgtgacgatccagaggcctctgctaagacgagccccaaggatgccatgaagatggaa
gtggaaggccataaagatggtaagaaggatgacgggacgaaggttgactcctctaagaag
gaaagcagagaggcctcgaagaaagctgaaatgggagacaaagacaaggattctgggaag
aaaggcccctcgtctactggggcatcaggtcaaggaaagagttcttcaaaggacagagat
ggaaaggccacaaaagatgacaaaggaagtatcagcagtagtagtgcaagcagctccact
cgaaacatatgggtgagcggcctgtcctccaacaccaaagcagctgatttgaagaacctc
tttggcaaatatgggaaggtttttagtgccaaagtggttactaatgctcgcagtcctgga
gccaaatgttatggcttggtgacaatgtcttccagtgcagaggtgggaaggtgcatctcc
cacctggaccgcacagaactccacagccagcagatatctgttgaaagggttaaaagtgat
cccttcaagaaagaaccttcaaagaaggaagcggatgacagaaccagctccagcaaatca
tcgagtgacaaacgtagtgcgtttgtgtcgacaagcaagactagcactagcaaaacccag
ccatcctccaaaaaagaggagaagaagtccgacaagccatcagacaaagacggcaaggat
tcatccaagaagcaggagtctaaaagcacaacatccagctcaggcccagatgcctccaag
aaagatgataaaaagcatggaggaaggaccaagagtcctggcaagatggtggtgattgat
catgccaaaggagacctcaacaaagtgagaccgcctttcaggagggggagatttgacaag
ccgggtttcaccaacaacaacatgatgcagcggagacccagatatttcatgcctcccgaa
gagatggagatgaatagagggagcgttttccccaacaagggaggcagcaaagacatcctc
ccctttcatcttatcaaagagcagaggttgcgtgtgcgtatggtccggctggagcgcgtc
cgcagaactatggagcttcgcaggcggcgtgagatagctgagcgggaacgccgggagcgt
gagcgtatcagtctgattcgggagcgggaggagagggagaacctgctcagggaacgccag
aggctggagatggagaggcagaaactggagagggagcgcatggagagggaaaggctggag
agagaaaggatccgcatagagcaggagcggcgtaaagaggcagagcgtatggctcgtgag
cgggaggagctgaggaggcagcaagagcagctccgctacgagcaggagaagagaaacaac
ctgaagagaggtcgtgatgtggaccacagccggagggatgatccctactggaatggcaac
aagaagattcagactgagtctgagggccgtctcaaccagggctcggactacaaccgccag
cagaaccgtttcactgagttcagcccccgagagagaggcagaggcttccccgaggctgca
gccgcggagcccaacactattgagagacgtaaccgcttcaacagtgagcctgaggcaaag
aaggcccgccccgctgctcgcagggacagctctgggtttgagcgctaccccaagaacttt
gagactgtccgcagggccgagcctcctccaactccacgcgcagacatccgtgacacagac
cgcagagcgatccgagacagggacgagcggcgagccgtgcccatgaccgagcggcgagcc
gtgcccatgaccgagcggcgggccgtgcccatgaccgagcgcccagccgggggcagagca
cccatgcctggcatgtctcataccggccgctcccccagaggcaccgggcacgctggtcat
gctactcatactgggcatgcaggatggaagaatgacggcggcatgagtgcacctaagggg
gacatacgtggagctgtgcgtactgggggtatgcgtccagagcgttcaggcagagatggc
caggggcctgccctcagaggaggctccacagccagccgaggaagatccaacttcagtggc
cgagatggaggaagacccatggtcatagcagaccagcatttcagctctggccgccaggtg
gtggtggagcggcatggccgggaccagccggcccccaggaaggagtggcacggtggggct
ggatcccagggagggggcttcccagacagccgcaggatgggagacagccgtggcagcatg
atggccccacacgcaagccactcttcgtctgcaatgaacagaatcgtgcagatcacgaac
agttccatgtccagtgttggtggattcaagcccttcaaaggagcacctagaaggttctaa
DBGET
integrated database retrieval system
