Coregonus clupeaformis (lake whitefish): 121558995
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Entry
121558995 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin alpha chain
KO
K07374
tubulin alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145
Phagosome
cclu04210
Apoptosis
cclu04517
IgSF CAM signaling
cclu04530
Tight junction
cclu04540
Gap junction
cclu04814
Motor proteins
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121558995
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121558995
09143 Cell growth and death
04210 Apoptosis
121558995
09144 Cellular community - eukaryotes
04530 Tight junction
121558995
04540 Gap junction
121558995
09142 Cell motility
04814 Motor proteins
121558995
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121558995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121558995
03036 Chromosome and associated proteins [BR:
cclu03036
]
121558995
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121558995
04147 Exosome [BR:
cclu04147
]
121558995
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121558995
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121558995
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121558995
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121558995
Exosomal proteins of other body fluids (saliva and urine)
121558995
Exosomal proteins of colorectal cancer cells
121558995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121558995
NCBI-ProteinID:
XP_041728227
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEXGEFSE
AREDMAALEKDYEEVGTDSVGDEEEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttctatgcacgtcggccaggccggagcccagatgggcaatgcatgc
tgggaattgtactgcctagagcatgggatccagcctgatggacagatgcccagtgataag
actattggtgggggagatgactccttcaacaccttcttcagtgagactggggctggcaaa
catgttcctcgtgcagtctttgtggacctggagccaaccgtcatcgatgaagtacgcaca
ggtacctaccgccagctgttccaccctgagcagctgatcacaggcaaggaggatgctgcc
aacaactatgcccgtggtcactacaccattggcaaggagatcatcgacctggtactcgat
aggacgcgcaaactggctgaccagtgcactggtctccagggattcctgatcttccacagc
tttggaggcggcaccggctctggtttcacctccctgctgatggaacgtctctctgtagac
tatgggaagaagtccaagcttgaatttgctgtttacccagctccccaagtttctactgct
gtggtggagccttacaactccatcctgaccacccacaccaccctggagcactccgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgcaggaacctagacattgag
cgccccacctacaccaacctcaacaggctgattggtcagatcgtctcctccatcaccgcc
tccctgcgtttcgatggagccctcaatgtggatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgctccagtcatctccgctgagaag
gcctatcatgagcagctgtctgttgctgacatcaccaacgcctgctttgagccagccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtttgctgtaccgt
ggtgatgttgtgcccaaagacgtcaactctgccatcgccacaatcaagaccaagcgcacc
atccagtttgtggactggtgtcccactggcttcaaggttggtatcaactatcagccaccc
acagtggtccctggaggagatctggccaaggtccagagagctgtgtgcatgctgagcaac
accactgccatcgctgaggcctgggccaggcttgaccacaagtttgacctgatgtacgcc
aagagggcctttgtgcactggtatgtgggagagggcatggaangaggagagttctcagag
gccagagaagacatggcagccctggagaaggattatgaagaagtgggtactgacagtgta
ggggacgaggaggaagaaggagaggagtactaa
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