Coregonus clupeaformis (lake whitefish): 121559018
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Entry
121559018 CDS
T08357
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121559018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121559018
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Others
R-spondin
121559018
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
7tm_1
LRR_9
LRR_EndoS
LRR_LRWD1
DHU1_N
LRRNT
Motif
Other DBs
NCBI-GeneID:
121559018
NCBI-ProteinID:
XP_041728247
LinkDB
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Position
19:complement(38510835..38540669)
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AA seq
848 aa
AA seq
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MAIMCFLAIIILTFLLGVADCAGTEGTGVLDTDTDCPSLCNCEDNGMLLRVDCVDLGFAE
LPSKLSVFTSYLDLSMNNLTLLPNRALSNLHFLQELRLAGNDLTDIPEGAFSGLFNLKVL
MLQNNHLKQVPSKALENLRNLQSLRLDANHIASVPESSFRGLASLRHLWLDDNALTEVPV
HALAILPTLQAVTLALNSITHIPDHAFANLTSLVVLHLHNNQIQSLGERCFDGLLSLETL
DLNYNDLAMFPMAIRALPNLKELSFHSNNIRSVPEHAFVGNPSLVTIYFYNNPIQFVGKS
TFQHLPALRMLSLNGATEITEFPDLTGTNSLETLAVTGTHISSLPGNLCDQLPNLIQLDL
SHNLIQHLPSFRGCRKIQKIDLHQNHIHEVPADTFLELTGLRTLDLSSNLLSSVPMEGFQ
DLTHLRLAGNTALRHTLPAQRLPKLRVVEMPYAFQCCAFVAGPGENSKYPYIWKTRNIKD
DRENFLVESEADTRPQHSVHCSPAPGPFQSCQSLFGSWLVRVGVWIIGILSFVSNSLVLV
SIVLSSKSPTCPTQHLLGVLTWVHLLNGVSSAALAVLDTISFDHFADYGAWWEGGPGCWI
FDFLSVFSSEASVFLLMAVVLERGCSVRGSQWSETEARRIPLGWGCAQGISALCCFLAGA
IAALPPLTMGKYGVSPLCMASPYGHASRLGCSYATALVLLNSLCYLLMTATYTRLYCHMD
RDTPEKEGVTVQDYSVTKLMASLLFTNCLLSFPVALPSFSSLLQLSVLSSPKVAKAILLL
VAPLPSCLDPLLYMLLCPHFREDLSRLLYWTTYRLKKGQRRTSLFSVNSEDTEKQSCDSM
QALVSLKL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggctattatgtgttttcttgctattattattctcacttttctgcttggagtggcggac
tgcgcgggcacagaagggaccggggttcttgacaccgacacggactgcccgtcgctttgt
aactgtgaagacaacggcatgcttctgcgcgttgactgtgtggacctcggtttcgcggag
ttgccttcaaagttgagcgtatttacttcctaccttgatctgagtatgaataacctcacc
ctgctgcccaacagagccctctccaacctacacttcctccaagagctacgactagcagga
aacgacttaacagacatccctgaaggggctttctctggcctcttcaatctcaaagtacta
atgctccagaacaatcacctaaagcaggttccaagtaaggctcttgagaacctgaggaac
ctacagtctctgcgtttggatgccaaccacattgccagtgtgcctgaaagctcctttagg
ggcctggcgtccttacgccacctgtggctggatgataatgccctgacggaggtgcctgtc
catgccctggccatcctgccaaccctgcaggcagtgaccctggccctcaacagcatcacc
cacatcccagaccacgccttcgccaatctcaccagtctggtggtcctgcatctccataac
aaccagatccagtcgttgggtgagaggtgttttgatgggcttctcagcctggagactcta
gatttgaactacaacgacctggccatgtttcccatggccatcagagccctccccaacctc
aaagagctgagtttccatagcaacaacatcagatctgtcccagagcatgccttcgtggga
aacccttcccttgtcacaatatacttctacaacaatcccatccagtttgtaggcaagtca
actttccagcatttaccagcgctacggatgctatcactcaacggagccacagagatcaca
gagttcccagacctcactggcacaaacagtttggaaaccctagctgtcacaggtacacac
atctcatcactgccagggaacctctgtgaccagttacccaacctgatacagctggatctc
tcccataacctgatccagcatcttcccagcttccgtggctgcagaaagatccagaaaatt
gacctccatcaaaaccatatccacgaggttccagcagacactttcctagagctgactgga
ctcagaacccttgacctcagctccaacctgctgtcctccgtccctatggaaggctttcag
gacctcacacacctcagactggccggcaacactgccctgagacacacactacctgcccag
agactacctaaactcagggtagtggagatgccctatgccttccagtgctgtgcctttgta
gctggccctggagaaaactcaaagtacccctacatctggaaaacgaggaacatcaaggac
gatagagagaacttcctcgtggagagtgaggcagacaccagaccccagcactctgtccac
tgttccccagcaccaggtccgttccagtcatgtcaaagtttatttgggagctggctggtg
cgagtcggtgtttggattatcggcatcctctccttcgtgtccaactccctggtcctggta
tccatcgttctctcctcaaagtccccgacctgtcctacccagcatctactgggagtccta
acctgggtccacctcctcaatggcgtctctagcgccgccctggctgtactagacaccatt
tcatttgaccactttgctgattatggtgcgtggtgggagggtgggccaggttgctggatc
tttgactttctgtcagtcttctcctcagaggccagtgtcttcctgttgatggcagttgtc
ttagagcgtggatgttctgtccgtggctcacagtggtccgagactgaggccaggaggatt
ccattggggtgggggtgtgctcaaggtatctcagctctatgttgcttcctggctggagcc
attgccgccttacctcccctcactatgggaaagtatggtgtctcccctctctgcatggcc
tctccctacggacacgcctcccgtttgggctgcagttacgccacagccctggtgctgctc
aactccctgtgctacctcctgatgacagccacctataccagactgtactgccacatggac
agagacacaccagagaaagagggtgtcactgtccaggactactctgtgaccaaacttatg
gccagcctcctcttcaccaactgcctcctctctttccctgtggcgctgccctccttctcc
tccctcctccagctctccgtcctctccagccccaaggtggctaaggccatcctgctcctc
gtggcgcccctgccctcctgtcttgaccccctgctctacatgctcctctgccctcatttc
agggaagatctcagcaggcttctctattggacaacatacaggctaaagaaagggcagcgc
cgcaccagtttgttctcagtgaactccgaagacacggagaaacagtcatgtgactccatg
caagccctcgtctctctcaaactgtag
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