Coregonus clupeaformis (lake whitefish): 121559114 Help Entry 121559114         CDS       T08357                                  Name (RefSeq) contactin-1a   KO K06759   contactin 1 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04514   Cell adhesion molecules Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     121559114  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:cclu04515]     121559114    00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cclu00537]     121559114 Cell adhesion molecules [BR:cclu04515]  Immunoglobulin superfamily   Contactins    121559114 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cclu00537]  Others   121559114 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ig_3 I-set Ig_2 ig fn3 V-set Ig_DSCAM-DSCAML_C C2-set_2 Motif Other DBs NCBI-GeneID:  121559114 NCBI-ProteinID:  XP_041728358 LinkDB All DBs Position 28:complement(25332837..25366083) Genome browser AA seq 1040 aa AA seqDB search MALNRLLLLVLSSSLSHTVAVLFGEPRIFGDDATGYGPIFEEEPLDIVYTKESPDRRISM NCRARANPAPTYRWRRDNWEIKLMELPNEHYSLVGGNLIINNPEEKKHAGTYICVAKNVY GTVISKEAKVKFGYLEEFPDEERDPVTVKEGQGAVLLCAPPKRWPTEVTFRWIYNEFPVF LHPDKRRFVSQSTGNLYISKVEASDAGNYSCYVFNPQIGKGVYSKFITLISTEETPEKRY KADLVVKFPDTTAMLNYNVTLECFALGNPAPHIVWRKIGATDLPASAEVSMSGALLHLYN VQYEDAAGYECEAINQKWQDWHQAWLYVEAAPEWAVTINNTQKDIGSEHTMSCVANGKPA PYIRWLKDGYSYGKGELKFSSLTLADSGMYQCIAENYWGIIYASAELRVIACAPTFEFNP VKKYLLGANNGRVVIECKPRAAPRPRFTWTKGKEVLFNNSRISIMFDGSLEILNATRNDQ GVYTCLAENDKGKANSTGTLTITEATQITVAPEDTQVMVGEEVRLQCQASYDPSLDITFI WSLDFRVIDLYLERKHYERIMDHEDSGELKIMNVQLRHEGRYTCTAQTVVDNVTASADLK VKGRPGPPGGVRVEEIRDTSVKLVWNQGANHGSPILGYTIQTRDFYALTEVDWRDASTSP TALDSMSVMADVMDLYPWMEYEFRVYATNEFGDGEASIPSMKIKTWDAVPVVAPTNVGGY GGKDGELIITWTPVQPQYFYGKKFGYVVAFKPHDDYDWWYETISDPETRRYVHRDSSFGV KSDDFQVREFQVKVKTFNSKGDGPYSLTTTVYYPRNVPSESPTDVYARPVSSHEALVWWL PVMDTGTGLQQYIDGYQVKYWRKYDDTEPGANRIFVSASMNQTRLENMLPDSHYLIEVRA YNGAGVGPPSEHCEMFTKRAPPSVAPQMWRYISYSGKWLYVWWHHIPYDWFGNESFPLYY KVMFRKTGYITGPIYMTGWHFIDFPMPQVGDYELEVRGRYEGGDGPIRKIRLQGKASFLR PTLSLAAMLLLALCIVGLGI NT seq 3123 nt NT seq  +upstreamnt  +downstreamnt atggctctcaacagactgcttctgctagtcctctcctcctctctgtcacacactgtggcg gtcttgtttggtgagcccaggatctttggagatgacgctacaggctacggtccaatattt gaagaggagcctctggatattgtctacacaaaggagtcacctgacagacgcatctccatg aactgtagagcacgggccaaccctgcacctacgtacagatggaggcgtgacaactgggag atcaagctgatggagctgcctaatgaacactacagtctggtgggagggaacctcatcata aacaaccctgaagagaagaaacatgcagggacctatatctgtgtcgccaagaacgtctac ggcactgtcatcagcaaggaggccaaggtcaagtttggatacctggaggagttcccagat gaagagcgggaccctgtgaccgtgaaggagggccagggggccgtgctgctctgtgctcct cccaagcggtggccaactgaggtgacgttccgttggatatacaacgagtttccggttttc ctccacccggataagcgtcgcttcgtctctcagagcaccgggaatctgtacatctccaag gtggaggcgtcagacgcagggaactactcctgctatgtgtttaacccacagatcggcaag ggagtctactccaagttcatcactcttatatctacagaagagaccccagagaagaggtac aaggccgacctcgtagtgaagttccctgacaccacagctatgctcaactacaacgtcaca ctggagtgcttcgctctgggaaatccggcccctcatatcgtctggaggaagataggtgct accgacctgcctgctagcgctgaggtcagcatgtctggagcgctgctccacctctacaac gtccagtatgaagatgcagcagggtacgagtgtgaggccatcaaccagaaatggcaggac tggcatcaggcgtggctctacgtagaggctgctcctgagtgggctgtgaccatcaacaac acccagaaggacatagggtcagaacacaccatgtcctgtgtagctaacgggaagcctgcc ccgtacatccgatggctcaaggatggatactcgtatggtaaaggtgagctgaagttctcc agtctgacgcttgctgactctgggatgtaccagtgtatcgctgagaactactggggtatc atctacgccagcgctgagctacgtgtcattgcttgtgccccaacgtttgagttcaaccca gtgaagaagtatcttctaggagctaacaacggccgtgtggtcatagagtgtaaacccaga gctgcccccagacccaggttcacctggaccaagggaaaagaagtgctcttcaacaactca cggatctccataatgtttgatgggagtctggagatcctgaacgccaccaggaatgaccag ggggtttacacctgcttagctgagaacgacaaggggaaggccaacagcacagggactctc accatcacagaggcgacccagatcacagtggccccagaggacacccaggtgatggtaggg gaggaggtgcgtctgcagtgccaggcctcctatgaccccagtctggacatcaccttcatc tggtctctggacttcagggtcatcgacctctacctagagaggaagcactacgaacgcatc atggatcatgaggacagtggagagctgaagataatgaatgtccagttaagacacgaggga cgctacacatgtacagcccagactgtcgtggacaacgttaccgcgtcagctgacctcaag gtcaaaggtcgtcctggtcctcccggtggggtgagggttgaggagatcagggacacctcg gtgaagttggtgtggaaccaaggggccaaccacggcagccccatcctcgggtacaccatc cagaccagagacttctacgcactaactgaagtggactggagggacgcctccacctcccct acggccctggatagcatgtcagtgatggctgatgttatggacctgtacccctggatggag tatgagttcagggtctatgctactaacgagtttggagacggggaggccagcatcccttcc atgaagatcaaaacctgggacgcagtgcctgtggtggccccgaccaacgttggaggctac gggggtaaagatggagagttgatcatcacatggacacccgtgcagccgcagtacttctac ggcaagaagtttggctacgttgtggccttcaagcctcatgatgattatgactggtggtat gagaccatatcagacccagagacacgacgctacgtccatcgagactcctctttcggggtc aagtcggacgacttccaggtcagggagttccaggtgaaggtgaagacgtttaactccaaa ggagatggaccctacagcctgacaaccactgtctactacccacgaaatgtcccctctgag tctcctacagatgtatacgccaggcctgtctcgtcccacgaagctttggtctggtggcta ccagtcatggacactggtaccggccttcagcagtacatagatggataccaggtgaagtac tggaggaagtatgacgatacagagccgggggccaatcgtatctttgtgtccgcctccatg aaccagaccaggctggagaacatgctgccagactcccactacctcatcgaggtcagagcc tacaacggagccggtgtcggcccgcccagcgaacactgcgagatgttcaccaagagagca cctccaagtgtggctccccaaatgtggcgttatatcagctactctggcaagtggctgtac gtgtggtggcaccacatcccctacgactggtttggcaatgagtccttcccactatattat aaggtgatgttcaggaagactggctacatcacagggccaatctacatgacaggctggcac ttcattgacttccccatgccccaggtaggggactacgagctggaggtcagaggtcgctat gagggaggagacggccccatcaggaagatcaggcttcagggtaaggcgtctttcctgaga cccactctcagtctggccgccatgctactgctggccctgtgcatcgtgggattgggaata tag

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