Coregonus clupeaformis (lake whitefish): 121559201
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Entry
121559201 CDS
T08357
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121559201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121559201
04090 CD molecules [BR:
cclu04090
]
121559201
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
ALCAM
121559201
CD molecules [BR:
cclu04090
]
Proteins
121559201
BRITE hierarchy
Motif
Pfam:
Ig_3
ig
Ig_2
I-set
C2-set_2
V-set
Syndecan
DUF6773
Ig_4
Motif
Other DBs
NCBI-GeneID:
121559201
NCBI-ProteinID:
XP_041728426
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All DBs
Position
5:complement(4943442..4998272)
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AA seq
560 aa
AA seq
DB search
MHFSSCLYALLVALVYQVSGMDTVIGLYGETVEVPCNNGAPKPKDLFITKWKYDNGDLLT
QLKDQDASVIATDKYKDRVSMAENSSLLIAAATLKDEKTFTCMVVAGADISEYPVKLLIH
KAPTGVEITALATELEIGKPTQLGQCSTPDAHPAANITWFKNKKPLVAGEKGIIISSKVK
VDEVTGLTTTSSTLQYTAEKGDTGALFTCGALNALSSPVSFTVTYPTERVSLHVISKGPL
MEGDNVTLKCKADGNPPPTSFNFHVQGEVVKVENSDSYTVTDVTRDSTGEYKCSIIDNAK
MEDSKNITINYLDMSLSPSGKVLKSVGESLALTLQTDASGELKVSWTKDNGKLDKRPKFD
KLTYSDSGKYEVVVTMGALIKKASFELVVEGIPVIRRLAKQRGEDGQHKVLTCEAEGSPK
PTVAWSVNGTSADESPYVNGKISHKLTIVPTVNLTVVCTVSNELGQDTRAINVLTLFEEV
RMDKQGSSDDGDMTKLVVGVIVGLLLATVVVGLAYWLYMKKSKQGSWKTGEKEDGSTEES
KKLEEKIEEKLEENSQKVEV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcacttttccagctgtctgtatgcactcctcgtcgcgcttgtctaccaagtcagcggt
atggatactgttatcggcctgtatggagagaccgttgaggtgccatgcaacaatggagca
cccaaaccaaaggacctgttcattaccaaatggaaatatgacaatggagacctgctaacc
cagcttaaagaccaggacgcctctgtcatagccaccgacaagtacaaggaccgtgtcagc
atggccgaaaactccagcttgctgattgcagcagcaacactgaaggacgagaagactttc
acctgcatggtggtggctggggctgacatctcagaataccctgtcaaactccttatccac
aaggctccaaccggagtggagatcacagccctagccacggagctggagattggcaaacca
acccagctagggcagtgcagcacccctgatgcgcacccagctgccaacatcacatggttc
aagaacaagaaacctctggtagctggtgagaaaggcattataatcagttccaaagtgaag
gtggacgaagtcactggcctcaccaccacctcctccactctgcagtacacagctgagaag
ggagacacaggtgctctgttcacctgcggggccctgaacgccttgtcctccccagtctcc
ttcactgtcacctaccccacagagagggtcagtctgcatgtcatttctaaagggcccctt
atggaaggagacaacgtgactctgaagtgcaaggccgacgggaacccacctcccaccagc
ttcaacttccacgttcagggagaggtggtgaaggtggagaactctgactcctacactgtg
actgatgtcacacgtgacagcacaggggaatacaagtgttctatcattgacaatgccaag
atggaagactccaagaacattaccatcaattacctggatatgagtttgagcccctcaggg
aaggttttgaagagcgtcggagaaagcttggctctgaccctgcagaccgatgcatctgga
gaactcaaggtgtcctggactaaggacaatggaaagctggacaaaaggcccaaatttgac
aagctgacctactctgattctggaaagtatgaggttgtggtcaccatgggcgctctcatc
aagaaagcctctttcgagctggtcgttgaaggtattccagtcatcaggcggttggccaag
cagcgtggcgaggacggccagcacaaggtactgacctgcgaggctgagggctcccccaaa
cccaccgtggcctggagcgtcaacggcacctcggctgatgaaagtccctacgtcaatggg
aagatctcacacaagctgaccattgtgcctacagtcaacctgacagtcgtctgcactgtg
tccaatgagcttggccaggacaccagggctattaacgtgttgaccttatttgaggaggtg
agaatggataaacaaggctcatcagatgacggtgacatgacaaagttggtggtgggagtt
attgtgggtctgctcctggccactgtagttgtgggtctagcatactggctgtacatgaag
aaatccaagcaaggcagctggaagactggtgagaaggaggatggatccactgaggagagc
aaaaaactggaggagaaaatagaggagaagctggaggagaacagccagaaagttgaggtg
taa
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