Coregonus clupeaformis (lake whitefish): 121559214
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Entry
121559214 CDS
T08357
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04371
Apelin signaling pathway
cclu04514
Cell adhesion molecules
cclu04520
Adherens junction
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121559214
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121559214
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121559214
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121559214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121559214
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121559214
04090 CD molecules [BR:
cclu04090
]
121559214
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121559214
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121559214
CD molecules [BR:
cclu04090
]
Proteins
121559214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
121559214
NCBI-ProteinID:
XP_041728433
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MGAFWFVELGVLILFLQAFKPGASEESKCLPGFNSEIYVFNVERNHLQSGRRLGKVVFDD
CTSRTRFLFHSEDSRFKVDGNGTLKLKRGVTLHNGQEEFDVSTHSKGKKITVPVRVLHEA
RHGHHHNHHHRHEMTTQPQPGASLSLPVLNFPKSSGGLKRRKRDWVIPPINFPENDRGPF
PKNMVQIRSSKDKKVKIQYSITGTGADQPPVGLFTVDKNSGFLYVTQPLDREKQDQYVLQ
AHAVALGSDTAEEPMEIIVKVIDMNDNKPVFTQDPFTGTVLEASKPNDEVMQVTATDADE
KGSANSDVRYTIIKQDPLLPSPNMFVINPVTGWIRVNAPGLDREKIPKYTLEIQAADMDG
DGLTSFSKAIITVTDSNDNAPQFVTPLDTVSVPENKVDALVVKMPVTDGDEPHSSAWATT
YKIVDGDPQGLFSVSTGPSKLEGIITTAKPLDFEKNNKYTLLVTVENEVPFAVSIPTSTA
TVIVNVEDVNEAPVFTPVEKNIRKPEDLPVDSDLVLYTATDPDTARKQKVTYKIGNDLAG
WLSINKDTGLIKVKSLMDRESPFVQDNKYSVIVLGIDNDEVPATGTGTLIIELEDVNDNA
PTIDESVIRVCNKESSPQLLSVTDKDGAGFAAPYTVQLQGSSHSNWTARMNDTKTGIILT
LKTMLDSGDYTVVLRVSDNQGLHKDCTIQASVCDCKGADFQCTDKAVAGFGLSSILGILG
AVLLLLLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRG
LDNRPDVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYE
GGGSEAGSLSSLNSSSSGDDQDYDLLQEWGPRFKKLSDMYGGGED
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgggggccttttggttcgtggagttgggcgtattaatattatttctccaggctttcaag
ccaggggcgtcggaggagtcaaagtgtctaccaggtttcaattcagaaatttacgttttc
aatgtcgaaagaaatcacttacaaagtggccggagactaggaaaagtggtttttgatgac
tgcaccagccgcaccagatttctctttcactccgaggattcacgcttcaaagtagatggc
aatgggacactgaaactgaagaggggggtgactctgcataatggccaagaggagttcgat
gtctctacccactccaagggcaagaagatcacggttccagtcagagtgctgcatgaggcc
agacacggccaccaccacaatcaccatcaccgccatgagatgaccacccagccccagcct
ggagctagtctgtctctgccagttctgaacttccccaagtcttcaggaggtctgaaaaga
aggaagagggactgggtcattcctcccatcaacttcccagagaatgaccgaggccccttc
cccaagaatatggtgcagatcaggtccagcaaggataaaaaggtgaagatccagtacagc
atcactggcactggggcagaccaacctcctgtgggactcttcactgtggacaaaaactct
gggtttctctatgtgacccaacctttggacagggagaaacaagaccaatacgttctccaa
gcccatgctgttgcattgggttcagatacagctgaggagcccatggagatcattgtgaaa
gtaatcgatatgaatgacaacaaacctgtatttacccaagatccatttacgggaacagtt
cttgaggcatcaaaaccaaatgacgaggtcatgcaggtaacggccactgatgctgatgag
aagggctctgccaattctgatgtcagatacaccattatcaaacaggaccctctactacca
agccccaacatgtttgtcatcaaccctgtgaccggatggattcgggttaacgcacctggg
ttggacagagagaaaattcccaaatatactttggaaatccaagccgccgatatggatgga
gatggccttaccagctttagcaaagccatcattacagtaacggacagcaatgacaacgcg
ccacagtttgtgacgcctttggacaccgtgtcagtcccagagaataaagtggatgccttg
gtggtgaaaatgccagtgactgatggagatgagcctcactcctctgcctgggccaccacc
tacaagatagttgacggggaccctcaaggccttttcagtgtgagcacaggccctagcaag
ctggagggcatcattacaacagccaagccccttgactttgagaagaataacaagtacact
ctgctggtcactgtggagaatgaagtcccattcgccgtcagcattccaacctccactgct
actgttatagtgaatgtggaagatgtaaatgaagctccagtcttcaccccagtggagaag
aatatcagaaaacctgaggatctccctgttgacagtgacctggttctgtacacagccaca
gacccagacactgcaaggaaacagaaagtcacatacaagataggcaatgatcttgctgga
tggctcagtatcaacaaagacactgggctgatcaaagtcaagagcctcatggacagagaa
tccccttttgtccaagacaacaaatactctgttattgttctgggcattgacaacgatgaa
gtcccggcaactggcactggcacccttatcatagagctggaggatgtgaatgacaatgct
ccaaccatcgacgagagtgtgattagggtctgcaacaaggagtcctccccacagctgctg
tcagtcactgataaagatggcgcgggcttcgctgctccatacaccgtacagcttcagggg
tcgtcccattctaactggactgccagaatgaatgacacaaagactggcattatcctgaca
ctgaagactatgttggacagtggagattacacagttgtcctgagagtgtctgacaaccag
ggcctgcacaaggactgcaccatccaggcctcagtgtgtgactgcaaaggagctgatttc
cagtgcaccgataaagctgtagcaggcttcggcctctctagcattctgggaattctagga
gccgtcttactactcctattgttgtctcttctgctgctcatgttcctgaggaagagaggt
ggtgagaagaaggagcctctgctgcaggaggatgatgtcagggacaacatctactactac
gacgaggagggaggtggcgaggatgaccaggatttcgacttgagcgttctgcacagaggt
ctggataaccgtcctgatgttttccgtaatgacattgctccaaccatggcccggccagag
tatcgcccacgacccgccaacccagccgacattggcaacttcattgatgataacctgaag
gcagctgacaacgaccccactgctcctccctacgactccctcctggtgtttgactatgaa
ggaggtggctctgaggccggctccctcagctccctcaactcctccagctcaggagacgac
caggactacgacctccttcaagagtggggcccacgcttcaagaagctgtctgacatgtac
ggaggaggagaggattga
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