KEGG   Coregonus clupeaformis (lake whitefish): 121559236
Entry
121559236         CDS       T08357                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137  Mitophagy - animal
cclu04144  Endocytosis
cclu04145  Phagosome
cclu04148  Efferocytosis
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121559236
   04145 Phagosome
    121559236
   04137 Mitophagy - animal
    121559236
   04148 Efferocytosis
    121559236
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121559236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121559236
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121559236
   04031 GTP-binding proteins [BR:cclu04031]
    121559236
Membrane trafficking [BR:cclu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    121559236
 Endosome - Lysosome transport
    121559236
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121559236
  Exosomal proteins of other body fluids (saliva and urine)
   121559236
  Exosomal proteins of colorectal cancer cells
   121559236
  Exosomal proteins of bladder cancer cells
   121559236
GTP-binding proteins [BR:cclu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    121559236
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 121559236
NCBI-ProteinID: XP_041728493
LinkDB
Position
1:24714285..24737158
AA seq 220 aa
MAGRGGPARPNGPATGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADVANKRAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEAQGAAGAGGRTRAGVDLQEPALQGRSGQCCGGSN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcgggtcgtggaggaccggcgcgacccaacggcccagcgacaggcaacaagatctgc
cagttcaagctggtgctgctgggggaatcggcggtgggcaagtccagcctggtgctacgc
ttcgtcaagggccagtttcaggagtaccaagagagcaccatcggagctgcctttctcaca
cagactgtctgcctggacgacacaacggtcaagtttgagatttgggacacggcaggccag
gagcgataccacagcctggcccccatgtactacagaggagcccaggcggccattgtggtc
tatgacatcaccaacacagacacttttacgcgagcaaaaaactgggtgaaggagctgcag
agacaagccagccccaacatcgtcatcgctctggccgggaacaaggccgacgtcgccaac
aagagagcggtcgatctccaggaagcacaggcctatgccgatgacaacagtctactgttc
atggagacttcagccaagactgctatgaatgtcaacgaaatcttcatggccatagccaag
aagctgcccaagaacgaggctcagggcgcagctggggcagggggccggaccagagcagga
gtggaccttcaggagccggccctccagggccgcagcggccaatgctgtggcgggagcaat
tag

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