KEGG   Coregonus clupeaformis (lake whitefish): 121559256
Entry
121559256         CDS       T08357                                 
Name
(RefSeq) ATP-binding cassette sub-family C member 4
  KO
K05673  ATP-binding cassette, subfamily C (CFTR/MRP), member 4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010  ABC transporters
cclu04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    121559256
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    121559256
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cclu02000]
    121559256
Transporters [BR:cclu02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    121559256
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_21 AAA_16 AAA_29 MMR_HSR1 AAA_22 nSTAND1 RsgA_GTPase Dynamin_N DUF87 cobW ABC_ATPase
Other DBs
NCBI-GeneID: 121559256
NCBI-ProteinID: XP_041728485
LinkDB
Position
16:908249..960552
AA seq 1322 aa
MEQLKKDVKFNPSTTANLFSRVFFCWVTPLFSIGNKRRLEEDDMYQVLPDDASQVLGEEL
QRHWDKEVRMAAKELRMPKLTKAIVKCYGKPYAMLGIFSFSVEVIKVIQPVFLGKLIQYF
EKYDPNDMDALYEAFGYAAGVSLSTVALTILQSLYFYHALRIGMKIRVAMCHMIYKKALC
LSSAAMGRATTGQIVNLLSNDVNRFDEVTMNLHYLWIAPLQAVVVIILLWYEIGPSCLAG
MAVLVFLMPLQTMFGKLFGSLRSKTAVLTDNRIRTMIEVVSGIRIIKMYAWEKPFSALVN
EVRRKEISKIMSSSYLRGLNIASFFAASKIIVFITFTVYVLLGNTISASRVFVAVSLYGA
IKLTVTLFFPLAIEKVFETIISIRRIKNFLLLDEIERNNMRFTLEEEKDASVEIKDLICY
WDKCLEAPSLQNLSLTVKLEQLVAVIGPVGAGKSSLLSAILGELPHDKGVLRIKGQLTYS
SQQPWVFPGTIRSNILFGKELHLQKYEKVLRACALKRDMELLPDGDLTVIGDRGATLSGG
QKARVNLARAVYQDADIYLLDDPLSAVDAEVGRHLFEQCICGILKNKPRILVTHQLQYLQ
AADQILVLKEGHVVARGTYSELQHSGVDFTSLLKSDEEEPQTNNNHSVVKHALSQNSVCS
RNSVVSHTTSMHSVKDGAEQLPEEPAQTVAEERRSEGNIGATLYFKYFNAGASILVMLGT
VLLSLIAEVAYVLQDWWLAYWAGEQEKLNINGTVIVQNGLNITQELDLGFYMGIYAGLTL
ASVIFGFARSLLMFNVLVKAAQSLHNRMFNSILRTPVRFFDINPIGRILNRFSKDIGQLD
SMLPNTFVDFCQLILQNIGVVVVAASVMPWILIPVVPLLIVFLFLRRYFLQTSRDVKRLE
STTRSPVFSHLSSSLQGLWTIRAFRAEERFQNIFDTHQDLHSESWFLFLVTSRWFALRLD
GICSAFVTVTAFGCLFLRDGLEAGAVGLVLSYAVTLLGNFQWTVRQSAEVENMMTSVERV
VEYTELESEAPWETQKRPSPEWPSQGLITFDRVNFSYSSDGPLVLKDMKAMFRPKEKVGI
VGRTGAGKSSLVSALFRLAEPEGRIYIDGVLTSEIGLHDLRQKMSIIPQDPVLFTGTMRK
NLDPFSQHTDEDLWNALQEVQLKYVVEELPNKMETVLAESGSNFSVGQRQLVCLARAILR
KNRILIIDEATANVDPRTDELIQKTIRDKFRECTVLTIAHRLNTIIDSDRILVLGAGMIQ
EFDEPYVLLQNQESALYRIVQQTGKAEAAALLESAKQAYVNNSNSHGPKKANGVVVFFET
VV
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggaacaactgaagaaagatgttaaatttaatccatcaacaacagccaatttattttca
cgggtgtttttctgttgggtaacccctttattcagtattggaaataagcggaggctagag
gaagatgacatgtaccaagtgcttcctgatgatgcttctcaggtcctgggagaggaactg
cagaggcattgggataaggaggttcgaatggctgccaaggagctgcggatgcccaaactc
accaaagccatcgtgaagtgctatgggaaaccctacgcaatgctggggatctttagtttc
tccgtagaggtgattaaggtgatccagccagtgttcttgggaaagctgatccagtacttt
gagaagtacgatccaaatgacatggatgcactgtatgaggccttcggctacgctgctggt
gtctctctgtccaccgttgcgctgaccatcctccaaagtctctacttctaccacgccttg
aggatcggcatgaagatacgagtggccatgtgtcacatgatctacaagaaggccctgtgt
ctcagcagcgcagcaatgggaagagcaaccacaggccaaatagtgaacctgctatccaac
gatgtcaacaggtttgatgaggtgaccatgaatctgcactacctctggatagcacctctt
caggctgtggtggttatcatactcctgtggtatgagattggcccgtcgtgcctggcaggc
atggctgtccttgtgttcctcatgccactacagaccatgtttggaaagctcttcggatcc
ctcaggagtaagaccgctgtcctgacagacaatagaatacgcaccatgattgaagtggtg
tctggaatcaggatcatcaaaatgtatgcctgggaaaagcccttctcagcactcgtcaat
gaagtccgaaggaaagagatctccaagatcatgtctagctcctacctgcgaggcctcaac
atagcctccttctttgcggccagtaagatcatcgtcttcatcaccttcactgtctacgtc
ctcctggggaacaccatctcagccagccgggtgtttgtggcagtgtctctatatggtgcc
atcaagctcacagtgaccctcttctttccactggccatcgagaaggtgttcgagaccatc
atcagtatccgcaggatcaagaatttccttctgttggatgagattgagagaaacaacatg
agattcaccctggaggaagagaaagacgcctctgttgagatcaaggacttaatttgctac
tgggacaagtgtctggaagccccgtctctccagaacctgtcactcacagtgaagttggag
cagcttgtcgcagtcattggacctgtgggggctggaaagtcctctctgctaagcgccatc
ctgggggagctgcctcacgacaagggtgtgttgaggatcaaaggtcagctgacctactcc
tcccagcagccctgggtgttccctggaaccatccgcagcaacatcctgtttggcaaagag
ctccatcttcagaagtatgagaaggtcctgagagcctgcgccctcaagagggacatggag
ctgctgccagacggggacctgacagtgatcggggacagaggagccaccctcagtggggga
cagaaagctagagtgaacctggcccgggctgtgtaccaggatgctgatatctacctgctg
gacgaccctctaagtgctgtggatgctgaggtcgggagacacctgtttgaacagtgtatc
tgtggtattctgaagaataagccccgcatcctggtcacccaccagttgcagtacctccaa
gcagccgaccagatcctcgtcctcaaggagggtcacgtggtggcgagggggacatactcc
gagctgcagcactctggggttgacttcacctccctgctgaagagcgacgaggaggagcca
caaaccaacaacaatcactcagtggtcaaacacgccctctcccagaactctgtttgctcc
cggaattcagtggtctcccacaccacctccatgcactctgttaaagatggagctgaacag
cttccggaggagcctgcccagacagtagcagaggagagacgatcggagggcaacatcggt
gccaccctctacttcaagtacttcaatgcaggagccagcatcctggttatgctgggcaca
gtcctcctcagtctcatcgctgaggtagcgtacgttcttcaggattggtggctggcctat
tgggcaggagagcaggagaaactcaatattaacggcactgtgattgtccaaaatggcctc
aacatcactcaagagttggacctcggtttctacatgggcatttatgcaggtttgactctg
gcctcagtcatctttggctttgccaggagtctgttgatgttcaatgtgctggtgaaagct
gctcaatctctgcacaaccgcatgttcaactctatcctccgaacgcctgtacgcttcttt
gacatcaacccaattgggagaattctcaacaggttctctaaggacatcggccagctggat
tccatgttacctaatacctttgttgacttctgtcagttgatcctgcagaatatcggcgtg
gtggtggtggcagcctcagtcatgccctggatcctcatccctgtggttcctctactcatc
gtcttcctgttcctgagacgctacttcctgcagacatcacgggacgtcaaacgcctggag
tccaccactcggagtcccgtcttctcccacctgtcctcgtccctccaaggtctgtggacg
atccgagccttcagagccgaggagagattccagaacatctttgacactcatcaggatctg
cactcagagtcctggttcctgttcctggtcacctctcgctggttcgctctccgactggat
ggaatctgttcggcctttgtcactgtcactgccttcggctgcctcttcctcagagatggg
ctggaggcgggagctgtgggtttggttttgtcctacgctgtcacccttcttgggaacttc
caatggaccgttcgtcagagtgcggaggtggagaacatgatgacgtcagtagagagggta
gtggagtacacagagctggagagtgaagcaccctgggaaacccagaaacgtccttctcct
gagtggccgagccaaggcctcataacctttgaccgggtgaacttctcctacagctcagac
ggacctttggtcctgaaggacatgaaggccatgttcaggcccaaagagaaggttggcatc
gtgggcaggacgggtgcggggaaaagctccctggtatcggcgctcttccgcctggcagag
ccagagggcaggatctacatcgatggagttttgacctctgagatcggccttcatgacctg
cgccagaagatgtccatcatacctcaggacccagtgcttttcaccggcaccatgaggaag
aacctggaccctttcagccagcacacagacgaggacctgtggaacgcactccaagaggtc
cagctgaagtatgtggtggaggagctgcccaataagatggagacggttctggccgagtcg
ggctccaacttcagtgtgggtcagaggcagctggtctgtctggcccgagccatcctgagg
aagaaccgcatccttatcatcgacgaggccacggccaacgtggaccccagaacagacgag
ctgatccagaagacgatacgagacaaattcagggagtgcaccgtgctcacaatcgcccac
cgcctcaacaccatcatagacagcgaccgcattctggtgctaggcgctggtatgatccag
gagtttgacgagccgtacgtcctgcttcagaaccaggaaagtgccctctacaggatagtc
cagcagacgggcaaggccgaggcagctgccctgctggaatcagccaaacaggcgtatgtg
aacaacagcaacagccatggtccaaaaaaggccaacggagtggtggtcttctttgagacg
gtcgtgtga

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