KEGG   Coregonus clupeaformis (lake whitefish): 121559262
Entry
121559262         CDS       T08357                                 
Name
(RefSeq) toll-like receptor 13
  KO
K18808  toll-like receptor 13
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:cclu04054]
    121559262
Pattern recognition receptors [BR:cclu04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   121559262
SSDB
Motif
Pfam: LRR_8 TIR TIR_2 LRR_4 LRR_6 LRR_9 LRR_5 ThsB_TIR LRRCT
Other DBs
NCBI-GeneID: 121559262
NCBI-ProteinID: XP_045081457
LinkDB
Position
16:755365..757563
AA seq 509 aa
MTGLHKLETLNLAGNKLSSIRQEEFKGVASLKTLLLFDNQIASMEDGAFEGLVNLTELKM
GSNKIPQIDIRKTVLSGLTCLTTLDISCNCITYVNDDKLNPPPFSHLTSLENLHIHSPRR
KGLSHLPINFLEGLKSLLAFKAGNLNIKDLHPDTFIHTPRLWFLDISKNEFTALTPKLFH
PTPRLNRMYLSKARLQSLDFLIGANLSRVTFLQVSKNDITVVNETVLRYLPALTYLDMQD
NAFTCGCSDAWFVQWMESDNQTQVDGAGEFTCNYPAELKGTKLLDVELQFCTVHLGLYYY
ISTTSLVLLNLIASFAYHFLKWQVIYGYYLFLAFLYDTKQRNKRMPHGCQYDTFISYNAH
DEPWVLRELLPELEGEQGWKLCLHHRDFQPGKPIIEKIMDGIYGSRKTICLISHRYLESE
WCSREIQVASFRLFDEKKDVLILVFLEEIHTHQLSPYHRMRKLVKRRSYLSWPRAGEHTG
VFWQQLRLALETKDSPAEENPILSGVEAL
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgactggtttgcacaaacttgagactttgaatttggcaggcaataaactgagctctatc
agacaagaagagtttaaaggcgtagcatcactcaagactttgcttttatttgacaatcag
attgcaagtatggaagatggagcctttgagggattggtcaaccttacagaacttaaaatg
ggctcaaataagatccctcaaatagacattcgaaagactgtgctctcaggacttacatgc
ttaacaactcttgatatatcctgtaattgcatcacatatgtaaatgatgataaattaaac
cctccacccttctctcatctgacatctctggagaacctgcatatccatagtccgcgtcgc
aagggactgtctcatctaccaatcaactttcttgaaggtctgaaatctttattggcattc
aaggcagggaatcttaacattaaggacctgcacccagacacattcattcacacaccccgg
ttgtggttccttgatatcagtaagaatgagttcacagccctcacaccaaagctgtttcac
ccaaccccaaggctcaacagaatgtacctgtccaaagcccgacttcagtccttagatttc
ctcataggagcaaacctcagtagagtcactttcttgcaggtgagcaagaatgacataaca
gtagtcaatgagacagtgttgcggtatctccctgccttgacatacctggacatgcaagat
aatgctttcacctgtggctgcagcgatgcttggtttgtccagtggatggagagcgacaac
caaacacaagttgatggtgcaggagaatttacctgcaactatcctgctgagctaaagggc
accaagctgttggacgttgagcttcagttctgtacagtacacttaggactttactactac
atctctaccacttctctcgtcctcctcaacctgatagcatcatttgcctaccacttcctg
aaatggcaggtcatttacggatattacctcttcctggctttcctctatgacaccaagcaa
aggaataagcgcatgcctcatggctgtcagtacgatacgttcatctcctacaacgcccac
gatgaaccctgggtcctgagggagctgctgccagagctggagggagagcagggctggaag
ctgtgtctccaccaccgggacttccagccaggcaaaccaatcatagagaaaattatggac
ggcatctatggaagccgcaagaccatctgtttgatcagccaccgctacctggagagtgag
tggtgctcccgggagatccaggtggccagcttccggctctttgatgagaagaaggacgtc
ctgattctggtgttcctggaggagattcatacccaccagctgtcaccctaccaccggatg
aggaagctggtgaagagacgatcctacctgagttggcccagagctggtgagcacaccggg
gtcttctggcagcaactacggctggctttagagaccaaggacagccctgctgaggaaaat
cccatcctctctggagtggaggctctgtga

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