Coregonus clupeaformis (lake whitefish): 121559262
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Entry
121559262 CDS
T08357
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cclu04054
]
121559262
Pattern recognition receptors [BR:
cclu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121559262
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_6
LRR_9
LRR_5
ThsB_TIR
LRRCT
Motif
Other DBs
NCBI-GeneID:
121559262
NCBI-ProteinID:
XP_045081457
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Position
16:755365..757563
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AA seq
509 aa
AA seq
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MTGLHKLETLNLAGNKLSSIRQEEFKGVASLKTLLLFDNQIASMEDGAFEGLVNLTELKM
GSNKIPQIDIRKTVLSGLTCLTTLDISCNCITYVNDDKLNPPPFSHLTSLENLHIHSPRR
KGLSHLPINFLEGLKSLLAFKAGNLNIKDLHPDTFIHTPRLWFLDISKNEFTALTPKLFH
PTPRLNRMYLSKARLQSLDFLIGANLSRVTFLQVSKNDITVVNETVLRYLPALTYLDMQD
NAFTCGCSDAWFVQWMESDNQTQVDGAGEFTCNYPAELKGTKLLDVELQFCTVHLGLYYY
ISTTSLVLLNLIASFAYHFLKWQVIYGYYLFLAFLYDTKQRNKRMPHGCQYDTFISYNAH
DEPWVLRELLPELEGEQGWKLCLHHRDFQPGKPIIEKIMDGIYGSRKTICLISHRYLESE
WCSREIQVASFRLFDEKKDVLILVFLEEIHTHQLSPYHRMRKLVKRRSYLSWPRAGEHTG
VFWQQLRLALETKDSPAEENPILSGVEAL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgactggtttgcacaaacttgagactttgaatttggcaggcaataaactgagctctatc
agacaagaagagtttaaaggcgtagcatcactcaagactttgcttttatttgacaatcag
attgcaagtatggaagatggagcctttgagggattggtcaaccttacagaacttaaaatg
ggctcaaataagatccctcaaatagacattcgaaagactgtgctctcaggacttacatgc
ttaacaactcttgatatatcctgtaattgcatcacatatgtaaatgatgataaattaaac
cctccacccttctctcatctgacatctctggagaacctgcatatccatagtccgcgtcgc
aagggactgtctcatctaccaatcaactttcttgaaggtctgaaatctttattggcattc
aaggcagggaatcttaacattaaggacctgcacccagacacattcattcacacaccccgg
ttgtggttccttgatatcagtaagaatgagttcacagccctcacaccaaagctgtttcac
ccaaccccaaggctcaacagaatgtacctgtccaaagcccgacttcagtccttagatttc
ctcataggagcaaacctcagtagagtcactttcttgcaggtgagcaagaatgacataaca
gtagtcaatgagacagtgttgcggtatctccctgccttgacatacctggacatgcaagat
aatgctttcacctgtggctgcagcgatgcttggtttgtccagtggatggagagcgacaac
caaacacaagttgatggtgcaggagaatttacctgcaactatcctgctgagctaaagggc
accaagctgttggacgttgagcttcagttctgtacagtacacttaggactttactactac
atctctaccacttctctcgtcctcctcaacctgatagcatcatttgcctaccacttcctg
aaatggcaggtcatttacggatattacctcttcctggctttcctctatgacaccaagcaa
aggaataagcgcatgcctcatggctgtcagtacgatacgttcatctcctacaacgcccac
gatgaaccctgggtcctgagggagctgctgccagagctggagggagagcagggctggaag
ctgtgtctccaccaccgggacttccagccaggcaaaccaatcatagagaaaattatggac
ggcatctatggaagccgcaagaccatctgtttgatcagccaccgctacctggagagtgag
tggtgctcccgggagatccaggtggccagcttccggctctttgatgagaagaaggacgtc
ctgattctggtgttcctggaggagattcatacccaccagctgtcaccctaccaccggatg
aggaagctggtgaagagacgatcctacctgagttggcccagagctggtgagcacaccggg
gtcttctggcagcaactacggctggctttagagaccaaggacagccctgctgaggaaaat
cccatcctctctggagtggaggctctgtga
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