Coregonus clupeaformis (lake whitefish): 121559398
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Entry
121559398 CDS
T08357
Name
(RefSeq) vacuolar protein sorting-associated protein 26B-like
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121559398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121559398
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
121559398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
121559398
NCBI-ProteinID:
XP_041728564
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Position
5:complement(5336218..5339901)
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AA seq
333 aa
AA seq
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MSFFSFGQSAEIDVVLTDAETRKKAEHKTEDGKKDKYFLFYDGETVAGKVNVTLKNPGKR
LEHQGIKIEFVGQIELYYDRGNHHEFVSLVKDLARPGELTQSQTFDFEFTHVEKPYETYT
GQNVKLRYFLRATVSRRLNDISKEMDIVVHTLSTYPELNSSIKMEVGIEDCLHIEFEYNK
SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPSVYHENDTIAKYEIMDGAPVR
GESIPIRLFLAGYEMTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEITLWRKGDVVR
KSMSTQATIGAQRFEGSASSESALEKAAREDSG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttcagttttggccaaagtgcagaaattgatgtagttctgactgatgctgag
acgagaaagaaggctgaacataagactgaagatgggaagaaggacaaatatttcctattt
tatgacggggagactgtggctggaaaggtcaacgttacactgaagaaccctgggaaaaga
ctggaacatcaagggataaaaatcgaatttgtaggccagattgagctgtactacgacaga
ggaaaccatcatgagtttgtctccctggtgaaagatctggctaggcctggtgagcttact
cagtcacagaccttcgactttgagttcacccatgttgagaagccctatgagacctacaca
ggccagaatgtgaagctacggtattttctgcgtgccacagtgagcaggagactgaatgac
atcagtaaagagatggatatcgtggtgcacacactcagcacgtacccagagctcaactcg
tcaataaaaatggaagttgggatcgaagactgtctccacattgagtttgagtacaacaaa
tccaagtaccacctgaaagacgtcattgtgggtaagatctacttcctgctggtgcggatt
aagatcaagcacatggaaattgacatcatcaaacgggagacaactggcaccggtcctagt
gtataccacgaaaatgacaccatcgccaaatatgagatcatggatggggctcctgttcgg
ggagagtcaattccaatccggttgtttctggctggctatgagatgacccccacaatgcga
gacatcaataagaagttctctgtgcgttactaccttaatctggtgctgattgatgaggag
gaaagacgctacttcaaacagcaggaaatcacactgtggaggaaaggggatgtggtgaga
aagagcatgtcgacccaggccaccatcggagcccagcggttcgagggctcagccagttcg
gagagtgctctggagaaggcggcgagggaggacagcggctaa
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integrated database retrieval system
