Coregonus clupeaformis (lake whitefish): 121559420
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Entry
121559420 CDS
T08357
Name
(RefSeq) sialic acid-binding Ig-like lectin 5
KO
K06549
sialic acid binding Ig-like lectin 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121559420
04091 Lectins [BR:
cclu04091
]
121559420
CD molecules [BR:
cclu04090
]
Proteins
121559420
Lectins [BR:
cclu04091
]
I-type lectins (Siglecs)
121559420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
ig
Ig_CD22
Ig_2
C2-set_2
C1-set
Ig_4
Izumo-Ig
V-set_CD47
Ig_6
Motif
Other DBs
NCBI-GeneID:
121559420
NCBI-ProteinID:
XP_041728578
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MWVLIWAALLLSLTERTTCNKQPPPPPPIASPWTITFSPAEITAEKGLCAVISCTFSHAE
NFNPTAAIWFKCPENGKCDQDENIIIHSETPSKAQEGYRKRVSLLETDMTKKNCSVIINN
IRKNDSGEYQFRLLSAFTYSKKVKITVRALTQKPSVLTPPLTEGEPATLTCTAPGICSGT
PPNITWTCRGTGDNITELRDNTTIQKREDLTSVTTSHFSTLTFTPSAEHHNMMVTCQVTQ
KKLQIEETVTLNVTYVKDPQITGNKTVKEDGTLGLTCSVDSYPPSDITWSKNRTSAPLQN
YTENATLTISNVTREHAGEYVCTAQHLNRTMTASTVVTVMYHPVILPGSGCVDQAEVMTC
VCVSQGVPLPLIEWPLLVLNTENTMSVLGSSVNSTISLPVRNHNNTTVECVSGNVVGVVR
AKLQVTQNKSQENQREKGRDSIIAILSDQKLIIAFVIGAALSATICCIFMCLTGKCKRQK
ERIPKDSDSKSPFMNLEMVACEDQQTDAGQAVGGEQTPLQGVLREGAENGGPLTSGATGK
SATREEPKEVDYASIDYSLLKKKTPEEAQKKTTTTESEYAEIKREKKKDGEEDEGEGSGV
MEEEEKENSKPAAETDEDTALYSNVKAIMGGE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcctcatctgggcagctctacttctctctctgacagagagaaccacatgcaac
aaacagccaccaccaccaccaccaatagcatcaccctggaccatcaccttcagtccagca
gagataacagcagagaagggactatgtgctgttatttcatgtaccttcagtcatgcagag
aacttcaatcctactgcagcaatatggtttaaatgccctgaaaatggcaaatgtgatcag
gatgaaaacataattatccactctgaaactccctctaaagctcaggagggttacagaaag
agagtgtctctactggagactgatatgacaaagaagaactgtagtgtaatcatcaacaac
atcagaaagaatgactctggagagtatcagttcagactgctaagtgcatttacatactcc
aagaaagtgaaaatcacagtgagagctctgacccagaagccctcagtgttgactcctcct
ctgacagagggagaaccagctactctgacctgcaccgccccggggatctgctctggaact
cctcctaacatcacatggacatgtagagggacaggagacaacatcactgagctcagagac
aataccaccatacagaagagagaggacctgaccagcgtcacaacatcccacttctcaact
ttgacctttacaccctcagctgagcaccacaacatgatggttacctgtcaagtaactcag
aaaaaacttcaaattgaagagacagtaactttgaatgtaacatatgtgaaagacccccaa
ataactggaaataaaacagtgaaggaggatggtaccctgggtctgacctgcagtgttgac
agttacccaccatctgacatcacttggagtaagaacaggacaagtgccccacttcagaat
tacactgaaaatgccactctcaccatctccaatgtgacaagagaacatgctggggagtat
gtgtgtacagcgcaacacctcaacaggactatgacagcttccactgttgtcactgtgatg
taccatcctgtgattcttcctggctctgggtgtgtggatcaggcagaggtcatgacctgt
gtgtgtgtcagtcagggggttcccttacccctcatagagtggccactgttggtgctcaac
acagagaacactatgtcagtgttgggttcctcagtgaacagcactatcagcctgcctgtt
agaaaccacaacaacaccactgtggagtgtgtcagcggaaatgtggtgggtgtagtgaga
gcgaagttgcaggtcacccaaaataagagccaagaaaatcaaagagagaagggacgggac
agtattatagctattctgtcggaccaaaaactgattattgcgtttgtgattggtgcagcc
ctctcagccaccatctgttgtatcttcatgtgtttgacagggaaatgtaaaagacaaaaa
gagaggatcccaaaggactcagactccaaaagccctttcatgaacctggagatggtggca
tgtgaagaccaacagacagatgcaggacaagctgtggggggcgaacagacacctctgcag
ggggtgctgagggagggagctgaaaatggagggcccctgaccagtggagccacgggaaaa
tctgccacaagggaagaacccaaagaagtggactacgccagtattgactactccctgctg
aagaagaagactcctgaggaggcacagaagaagaccaccaccacagagtcagagtatgcc
gaaatcaaacgagagaagaagaaagatggggaagaagatgaaggagaggggagtggtgtg
atggaggaggaggagaaagagaacagtaagccagcagcagagacagatgaggatacagcg
ctttactccaacgtcaaggctattatgggtggtgagtga
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