Coregonus clupeaformis (lake whitefish): 121559436
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Entry
121559436 CDS
T08357
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein-like
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121559436
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121559436
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121559436
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
121559436
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Ortholog
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GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
121559436
NCBI-ProteinID:
XP_041728596
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Position
16:complement(491113..494997)
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AA seq
578 aa
AA seq
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MDGEKRKGSRDGENSNGRGRLLIGLRFSRDSLHFLFRGRSGGVMARWVFRGVQLADDHWH
TLVLAFSGHYATLTVDCNTHLELRVHSKSLPSDLSVQGSRFHIGSRGRWKGLFSGLIRQL
VLVPGSGATARVCPSSNPRLAELSVPAVLLDLPLKETRSDLTLPSYETEVRVSVGLEPSC
SGSVRGQLWFNPVRRALYLCDGTLWVPMLQESQRLDYVLEQQVLSTSSETYDMEVFSVQG
LGLMAAMAHRSPSLGSAVYLWRDGGFHLYQKISTHGALSWRHFTMGKKIFLVVSNSREST
GKEETVEKDELSVIYRWNKKTQRFVHYQALQTHCARDWEAFRIQGHTYLAVANHRQGNTN
HTIDSVVYKWDRGTQLFEPHQALRTSGAYDWEAFTVGPYHFLAVANAFDGLTTHVDSVIY
VWVDGSFRLFQTIKTFCATDWEMFQIGSRVFLVVANGHRLHGNGPSRYAINSTIYELDMS
SQLFLRFQDIITYSAVDWEFFTVGEESYLVVANSFDGESHSLNSIIYRWQGYEGFVPIHR
LPTIGCSDWEFFTSGEESYLIYSSATAPLSKVFRLKTH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacggagagaagaggaagggaagtagagatggagagaacagcaacggtcgggggcgg
cttctgattggcctgcggttctccagagacagtctccacttcctgttcagaggtcgcagc
gggggggtcatggcgcgctgggtgttccgaggcgtccaattggctgatgatcactggcac
acgttggtgttagcatttagcggacactacgctactctcactgtggactgcaacacacac
ctggaactcagggttcactccaagtcgttgccctctgacctaagtgttcagggttccaga
ttccacatcggcagccgaggaagatggaaaggcctgttctcaggtctgatcagacagctg
gtcctggtgccaggctctggtgccaccgctcgtgtctgcccgtcctccaaccccaggctg
gcagagctgtctgtgcccgcggtgctgctggacctaccactcaaagagactaggagtgac
ctcaccctgccttcatatgagacagaggtacgggtgtctgtggggctggagccgtcctgt
tccggttcagtaagaggacagttgtggttcaaccccgtcaggagagcgctctacctctgt
gatggtacactctgggtccccatgctgcaagagtcccagagactagactatgtcttggag
cagcaggtcctctccaccagttcagagacgtatgatatggaggtgttcagtgtacaaggg
ctgggtttgatggcagccatggcccaccgctccccctccctgggctctgcagtctacctc
tggagagacggaggctttcacctttaccagaagatcagcacacatggagctctctcctgg
agacactttactatggggaagaagatattcctggtggtgtctaactccagggagagcaca
gggaaggaggagacagtggagaaggatgaactgtcagtgatctacaggtggaataaaaag
acacagagatttgttcattaccaggcgctgcagacacactgtgcacgggactgggaggcc
ttccgcatccaaggacatacctacctcgccgtggccaaccacagacaaggtaatactaac
cacaccatagacagtgtggtctacaagtgggaccgtggcacgcagttgtttgaacctcac
caagccctgcggacctcgggggcttacgactgggaagccttcacggtcggaccctaccac
ttcctggctgtggcgaacgcgttcgacggactgaccactcacgttgactcggtcatctat
gtctgggtggatggaagtttccgcttgtttcagactattaagactttctgtgccacagac
tgggagatgttccagatcggcagcagggttttcctggtggttgccaatggacacagactc
catggcaatggccccagtcgctatgccatcaactcaaccatctacgagctggacatgagc
tctcagctgttcctgcgttttcaggacataatcacatacagtgctgttgactgggagttc
ttcacagtaggagaggagagttacctggtcgttgctaactcatttgacggagagtctcac
tctctgaacagcattatctacaggtggcagggatacgagggttttgttcccattcaccgg
cttcccaccatcggatgcagcgactgggaattctttacttccggagaggagtcctatctg
atctactccagcgccacagcacctctctccaaagtgttccgtctgaaaacacactga
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