Coregonus clupeaformis (lake whitefish): 121559463
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Entry
121559463 CDS
T08357
Name
(RefSeq) cadherin-15-like
KO
K06809
cadherin 15, M-cadherin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121559463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121559463
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121559463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Sde0182_C
Cadherin_4
OCD_Mu_crystall
Motif
Other DBs
NCBI-GeneID:
121559463
NCBI-ProteinID:
XP_041728641
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASRGLAVLCVLVAGLCQVWSSGQAGREDLNPAILYPWRQKSSGGLSRVKRDWIIPPIRV
LENSKQVPENLVQIKSDKIFTGEVIYKLEGPGVDQDPKDLFEIDDKTGWIRSMIPLDREK
YRSFTLKAFALSPSGERLENPSTIEIVVLDQNDNRPNFSQKDFAGSVSEFSVPGTSVMSV
TATDADDPTTDNAILSYSIIGQESIPPLHINKTMFGINNETGSIYTRDVGLDREVVKGFR
LKLQVADMSGMGLTSFANAVIHVTDINNNPPRFSPDLYTMSAVENKVDFAIGWVNATDND
EPGTGNWETKYTIAKGNPSGNFAIHTDPVTNEGILSVVKALDYESQEVYTLTLTVENVNP
LSIKAPKDPVSSATVVVTVVNENEAPRFNKDPIEIVVPESVVPGTVLASNIAYDPDNAKL
KYDILRDPEGWLNINHETGEITARKPFNVRSPHVKNNIYNAVIRVTDTDGGGISTTASLV
ITLRETNDFLPQLFPLMGTVCSESGRETSGLFLTAVDEDLPPHAEPFTFHLQDINVSANW
TIIQVNETHAVLRPLVELETGEYAVTVLVTDSGTPSLSAYAQVNVTVCPCGKDGECKTEA
AAIFGTRVGVSFIALLVIMASIALLLLLLLLAVAVGNCRRHHIKKGAGLLVGDSDDDIRD
NVLNYDEQGGGEEDENAFNIDLLRNPADVGPFPTSFYPPVSGIPRGKQPLRKDYPDNLPS
PSYPRKPPADPTDIEDFINDGLEAADHDPNVPPYDTALIYDYEGEGSLAGSLSSIASASS
DSDQDYDYLNDWGPRFKKLANMYDPR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagggggttggcagtgttgtgtgtgctggtggctggcctttgtcaggtctgg
agcagcggccaagcggggagggaggacctgaacccagcgatcctgtatccatggagacag
aagagcagtggggggctgagcagggtgaagagggactggatcatccctccaatcagggtg
ttggagaacagcaagcaggtccccgaaaacctggtccagatcaaatcagacaagattttc
accggagaagtgatctacaagctggaaggaccaggggttgaccaggaccctaaggacctg
tttgagatagacgataaaacgggctggatcaggagcatgattcccctggacagagagaaa
tacagaagcttcacgctgaaagcctttgccctgtcgcccagtggagagagactagagaat
ccctccacaattgagatcgtagtgctggatcaaaatgataaccggcccaacttctcccag
aaagactttgctgggtctgtttctgaattctccgtaccaggcacatctgtgatgtctgtg
actgcgactgatgctgacgacccaaccacagacaacgctatcctgagctactccatcatt
ggccaggagagcatcccgcctctccacatcaataagaccatgtttggcatcaacaacgag
acagggtccatttacacacgagacgtgggcctagaccgggaggtggttaaaggttttagg
ttgaaactgcaggttgctgacatgtcaggcatggggttgaccagttttgccaatgcagtc
atacatgtgactgacatcaacaacaatcccccacggttctccccagacctgtacactatg
tcagctgtggagaacaaagtagactttgcgattggatgggtcaacgccacagacaatgat
gagccagggacaggaaactgggagaccaaatacaccatcgccaagggcaacccctctggg
aactttgccattcatacagaccctgtgaccaacgagggtattttgtcagtggtgaaggct
ctggactacgagtcccaagaggtgtatactctgactctgacggtggagaatgtgaaccct
ctcagcatcaaggcccccaaggaccctgtaagcagtgccacggtggtggtgaccgtggtg
aatgagaacgaggccccacgcttcaataaagaccccatagagattgtggttcctgagtct
gtggtccctggcaccgtgctggccagtaacatcgcctacgatcctgataatgcaaaactc
aagtatgacatactcagagatcctgagggatggctgaatatcaatcacgagactggagaa
attacagctaggaaaccgttcaatgtccgctcccctcacgtcaagaacaacatttacaat
gcagtcatcagagtcacagacacagatggtggtggaatctcgaccacagcgtctctggtg
atcactttgcgggagaccaatgacttcctccctcagctgttccccctgatggggacggtg
tgcagcgagtcaggccgggagacatctggtctgttcctgactgctgtggatgaggacctg
ccccctcacgctgaacccttcaccttccacctgcaagacatcaatgtgtctgccaactgg
accatcatacaggtcaatgagactcatgcagtgttgcgacccctggtagagctagagaca
ggggaatatgctgtcaccgtgttggtgacagactctggcacccctagtctcagtgcatac
gctcaggtcaatgtgactgtgtgtccgtgtgggaaagacggtgaatgtaagaccgaagct
gctgccatattcggaacacgagttggtgtcagtttcatcgccttactggtcatcatggcc
agcatcgcactccttctattgttgctgctcctggctgtagccgtgggtaactgcagacgg
catcatatcaagaaaggagcagggctgctggtgggggattcagacgatgacatccgtgac
aacgtcctgaactatgacgagcagggtggtggagaggaggatgagaatgccttcaacatt
gacctactgaggaacccagcagatgtgggaccattcccaacatccttctaccctccagtc
tctggcatccccaggggaaagcagccacttaggaaagactacccagacaacctgccctcc
ccctcatatccacggaaacccccagcggaccccactgacattgaggacttcatcaacgat
ggcctggaggcagcagaccatgaccccaatgtccctccctacgacacagctctgatctat
gactacgagggtgagggctctctggcaggcagcctgagctccatcgcctcagccagctca
gacagcgaccaggactatgactacctcaatgactggggaccacgctttaagaaactggcc
aacatgtacgacccacgctaa
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