Coregonus clupeaformis (lake whitefish): 121559475
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Entry
121559475 CDS
T08357
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121559475
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121559475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
bHLH_IRO3
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
121559475
NCBI-ProteinID:
XP_041728650
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MNICDDLMADQRMDISSTMNEFMSPGSTDLISSIGTPGMDYTRKRKSSTTDYQIDGFSFE
DSMDTDNDRLGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILRASDGFLFVVGCDRGKILFVS
ESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDSKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPLIKMEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDDDNEPDNEGCNLSCLVAIGRLHPHIVPQPMNNEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVCGSVPEGSDGIYPQLAASPQSMDSVLTDGTGK
RALQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPHNFTSTPPPDMSSP
GGKKIQNSGTPEHPSAGMIPGPDSIGYPYSNNSNLSDNAHIGIDIMDEPGSSSPSNDEAA
MAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttgtgatgatctaatggcagaccaaagaatggacatttcctccacgatgaac
gagttcatgtctcctggctccactgatctaatcagctcgatcggcacacccggcatggac
tacacacgcaagagaaaaagcagcaccacagattaccaaattgatggattttcttttgag
gatagcatggacacagacaatgatagacttggtgatcatcaaggccggattaaaaatgcc
agggaggcccacagtcagattgagaagagacgcagggacaagatgaacagcttcatagat
gagctggccgcactagtgcctacctgcaacgctatgtcccgtaaactggacaaactaacg
gtcctgcgcatggctgtccagcacatgaagaccttaagaggtgccgctaacccctacact
gaagctaactacaaaccagccttcctgtcagacgacgaactgaagcacttaatactgagg
gcatctgatggctttctgtttgttgttggctgcgatcgagggaagatactgtttgtttca
gagtcagtctacaaaatcctaaactacagccaaaatgacctgattggccagagcctgttt
gattacctgcatcctaaagacattgccaaagtcaaggagcagctgtcctcgtcggacacg
gcgccgcgggagcgcctcatcgattccaaaactggccttccagtaaagacagacatcacc
cccggcccatccagactctgctctggagccaggcgatccttcttctgcaggatgaagtgc
aatcggcccctcatcaaaatggaggacaaggactttccttccacctgctccaagaaaaaa
gctgaccgtaagagcttctgcacaatacacagtactggctacctgaagagctggccgccc
accaagatgggtctggatgacgacaatgaaccagacaacgagggctgcaacctcagttgc
ctggtggccattggacggctgcatccccacattgtccctcagccaatgaacaatgagatc
cgtgtcaagcccactgagtatgtctcgcgccatgccatcgacgggaagtttgtctttgtc
gatcagagggccactgccattttggcttatctaccccaagagttgctgggtacttcgttt
tatgagtactttcatcaagatgacattgggcaccttgcagaatgtcatagacaagtgctc
cagatgagggagaagatcaatacaaactgctacaagttcaaaataaaagacggctccttt
atcacgctgaggagtcgctggttcagttttatgaacccttggaccaaagaggtggagtac
attgtctccaccaacactgttgtctgcggcagtgtgcctgaaggatctgatggcatctat
cctcagctcgccgcctccccccagagcatggacagtgtactcacagacggaaccgggaag
cgggcccttcagaccgtgcctggcatccccggtggcacaagggcaggggcgggcaagatc
ggccggatgatcgcagaggaggtgatggagatccagaggataagaggctcctcgccctcc
agctgtggctctagtcctcacaacttcaccagcactccacccccagacatgtcgtcccca
gggggaaagaagatacaaaacagtggaactccagaacatccctcagcagggatgataccg
ggaccagactccataggctatccatactccaacaactccaatctaagtgataatgctcac
attggcattgacatcatggatgagccaggctccagcagcccgagtaatgacgaggcagcc
atggctgtgatcatgagcctcctggaggcagacgcagggctgggaggcccagtggacttc
agtgacctgccctggccactgtga
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