Coregonus clupeaformis (lake whitefish): 121559693
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Entry
121559693 CDS
T08357
Symbol
syngap1b
Name
(RefSeq) synaptic Ras GTPase activating protein 1b isoform X9
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
RasGAP
C2
PH
PH_2
Motif
Other DBs
NCBI-GeneID:
121559693
NCBI-ProteinID:
XP_041728742
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All DBs
Position
17:24473860..24605590
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AA seq
1474 aa
AA seq
DB search
MSYVPFQDARCAAPPSYRPHARSFAAPSYDRPDWNPRLCVISGNQLYMLDQEEVHPLLMR
ERRSELHRNKLLRRTVSVPVEGRHHPEMENARARRKSIANVKQPSMEIPPTAPPQPFRQS
SFLSRRLKGSIKRAKSQPKLDRTSSFRHMILPRFRSADQDRTRLMQSFKESHSHESLLSP
SSAAEALDLTLDEDAIIKPVHSSILGQEYCFEVTTASGTKCFACRSGAERDKWIENLQRA
VKPNKDNSRRVDNVLKLWIIEARELPAKKRYYCELCLDDMLYARTTSKPRTDTVFWGEHF
EFNNLPAVRNLRLHLYKETDKKRRKEKSTYLGLVSIPISSITGRQFVEQWYPVIQPSVLA
KGQAGGKIINASLRLKSRYQTMSILPMELYKEFAEYVTNNYRTLCAVLEPLLSVKSKEEV
ACALVHILQSTGKAKDFLSDMAMCEVDRFIDREHLIFRENTLATKAIEEYLKLIGHKYLK
DAIGEFIRALYESEENCEVDPMRTPPSVLPDHQANLRMCCELALCKIVNSHCVFPRELKE
VFASWRVRCAERGREDIADRLISGSLFLRFLCPAVMSPSLFNLTQEYPDEQTSRTLTLIS
KVVQNLANFSKFGMKEEYMCFMNEFLEMEWGSMQQFLYEISNLDSVSNAGGFEGYIDLGR
ELSILHSLLWEVMAQLSKSSNPNPQDAIIKLGPLPRLLNDISMALRNPHLQRQPSHQNQT
DRVHERQTERLLSRPSFNRGVSSEFQNLMMKDLNSSIDITRLPSPTSGVSSGGIMPSRAH
AQLSFQERDHPHRASKDVFYVTRPPLARSSPAYCTSSSDITEPDHKDSTLNSVSNLQSVA
MLNSSQASITGMGSFGGLSSQGGGGLGLGLSGQLRAGGRLSAGSGGSSMSGGLRLSQLSQ
MGTTTDSLSQQQQQQAAALRYPLSFQNPLFHLATGTADGPHLHHQHSRAHLPPPLLLAPE
PDPGGSHQAYIPQFAHGGFSRSEDLSTLRTGAGHLGQPAIIHSHSYSDDYSRADYARRQL
SMHGQDNLQQQQQMGMASQTGTSHSSLATPPSTVQPARQSSIAPPPAQRVKSQTSHQLSV
SAAAAPTPSAKTRPPSANLSPESNYGGRQQAPRQQLSVKDNTAPGLPHQQSSVRESQGPQ
GPQGGTTTTIQQSQQQQQQQQPQQQHLLKPSISKQGSGQSPSTLNPPTPANERTVAWVSN
MPHLSADITLEANRIDREEFKLKEYSKSMDESRLDRVKEYEEEIHSLKERLIMSHRKLEE
YEKRLLSQEQQTSKILSQYQSRLEDSERRLRQQQVEKDSQIKGIINRLMAVEDEIRGGAV
VEPPKANVRVFADQGAQHSSLGSADPCVNTEGGRGGGGGEEGGEKDGGMTTDPDPTISSS
GISSTGLPRNENGVPSPPVDPPPPTTPHLHPSPPQNGELCGNPTSCPVTSTEANESTATA
GLGIEEREQVKINTKPNQREKTQIKKSCHISFLF
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgttccctttcaagatgcgaggtgtgccgcccccccctcctatcgcccccat
gcccgttcctttgccgctccctcctacgaccgccccgactggaacccccgtctctgtgtg
atctccggaaatcagctctacatgttggaccaggaggaggtacaccctttgttgatgcgc
gagcggcgctccgaattgcacaggaacaagctgctgcgaaggacagtcagcgttcctgtt
gaggggaggcaccatccagagatggagaacgctcgcgcccggcggaagagcatagccaac
gtgaagcagccaagcatggagatccctcccactgcccccccccaacccttccgacaatcc
agtttcctcagtagaaggttgaagggctctatcaagagggctaagagtcagcccaaactg
gaccgcaccagcagcttccgccacatgatcctcccccgcttccgtagtgccgaccaggac
agaacgcgcctgatgcagagcttcaaagagtcccactcccatgagtccttgctgtctccc
agcagcgcggccgaggcgctggacctcaccctggacgaggacgccatcatcaagcctgtc
cactccagcatcctgggacaggagtactgcttcgaggtgactacggcttcgggaaccaag
tgctttgcatgtcgctcgggtgcagagagagacaaatggatcgagaatcttcagagagct
gtcaaacccaacaaggacaacagtcggagggtggacaacgtgctgaaactctggatcatc
gaggcgcgggagcttccggccaagaagcgttactactgcgaactttgtctggacgacatg
ctttacgcacgcaccaccagcaagccccggactgacaccgtgttctggggcgagcacttt
gagttcaacaacttgccagccgtccgcaacctacgccttcatctctacaaggagactgac
aagaagagacgcaaggaaaagagcacatacctgggactggtcagtatccctatctccagc
atcacgggccgacagtttgtggagcagtggtaccccgtcatccagcctagcgtcctggcc
aaggggcaagcagggggcaagatcatcaatgcctccctacgcctcaagtcccgctaccag
accatgagcatcctgcccatggagctgtacaaggagtttgcggagtatgtcaccaataac
taccggactctgtgtgcggtgctggagcctctactgagcgtgaagagtaaagaggaggtg
gcctgtgcgctggtccacatactacagagcacggggaaagcaaaggattttctttcggac
atggcgatgtgtgaggtagatagattcattgaccgagaacaccttatcttcagagagaac
actctggccaccaaagccatagaagagtacctcaagctgattggacataagtacctcaag
gatgcaataggggagttcataagggcactgtacgaatcggaggagaactgcgaggtggac
cccatgaggacaccaccctctgtccttccagatcaccaagccaatctccgcatgtgctgc
gaactggcactctgcaaaatcgtcaactcccattgtgtgttccctcgagagctgaaggag
gtgtttgcctcgtggagggtgcgctgtgcggagagggggagggaggacatcgcagaccgc
ctaatcagcggctcccttttcctgcgcttcctgtgtccggccgtcatgtccccctccctg
ttcaacctgacccaggagtacccagacgagcagacgtcacgcacgctcaccctcatctcc
aaagtggtgcagaacctggccaacttctccaagtttggcatgaaagaggagtacatgtgc
ttcatgaatgagttcttagagatggagtggggctccatgcagcagttcctctatgagatc
tccaatctggacagtgtgagcaacgcagggggcttcgagggctacatcgacctgggcagg
gagctgtccatactgcacagcctcctctgggaggtcatggcccagctcagcaagtcttct
aaccctaacccacaggatgccattatcaaactgggtcccttgccccgcctcttgaatgac
atcagcatggccctgcgtaacccccacctgcagaggcagcccagccaccagaaccagaca
gatagagtccatgagagacagacggagaggctgctctcacgacccagcttcaacagagga
gtctcctcggagttccagaatctcatgatgaaggatctcaacagctccatagatatcact
cgcttgccttcccctacctctggtgtgtccagtggggggatcatgccatctcgtgctcat
gctcagctgagtttccaagagcgcgatcacccacatcgagcctccaaagacgttttctat
gtaacccgccctcccttggcccgatccagccctgcctactgcaccagtagctccgatatc
accgagccagaccacaaggactccacattgaacagcgtgtctaacctgcagtcggtggcc
atgctcaactcctcccaggcctccatcaccggcatgggcagcttcggagggctcagcagc
cagggtggcggaggcctgggcttgggcctgagcggccagctccgggccgggggccgcctc
tcggccggctcggggggatccagcatgtcagggggcctccggctgagccagttgagccag
atgggtaccaccaccgactcgctgtcccagcagcagcagcagcaggccgccgccctgaga
tacccgctctccttccagaaccccctgtttcatctggccaccggcaccgcagatggaccc
cacctccaccaccagcacagcagggcccatctcccgccgcccctgctcctggccccggag
cctgaccccggtggctcacaccaggcctacatcccccagttcgcccacggggggttctcc
cgcagcgaggacctgtccaccctgaggaccggggcagggcacctggggcagccagccatt
atccactcacacagctatagcgacgactacagcagggctgattacgcacggcggcaactg
tccatgcacgggcaggataatcttcaacagcaacagcagatgggcatggcctctcagact
ggcacatcccactcctccctggccacacccccctccacagtccagcccgcgcgccagagc
tccatcgccccgcctcccgcccaacgcgtcaaatcacagacctcccatcagctgtccgtc
agtgcggctgctgctcccacaccatccgctaagacgcgaccgcccagtgccaacctatcg
ccagagtcgaactacggaggtcggcaacaggcaccacggcaacagctgtcggtcaaagat
aacacagcccctggactgccccaccagcagagctctgtcagggagagccagggcccccag
gggccacaggggggcactacaacaaccatacagcaatcacagcagcagcaacaacaacaa
caaccacagcaacagcacctgctcaaaccttccatcagcaaacagggttccggccagtcg
ccctcgacccttaaccccccgaccccggccaatgagagaacagtcgcctgggtctccaac
atgcctcacctctccgctgacattactctggaggcgaaccgcatcgaccgcgaggagttc
aagctgaaggagtactccaaaagcatggatgagtctcgcttagacagggtaaaggaatac
gaggaggaaatccactccctaaaggagcgactgatcatgtcccacaggaagctggaggaa
tatgagaagaggctcctttcccaggagcagcagaccagtaagatcctctcacaataccag
agtcgcctggaggacagcgagaggaggctacggcaacagcaagtggagaaagactcccaa
attaaaggaataatcaacagactcatggctgtggaggatgagataaggggaggagccgtc
gttgagccgccgaaagctaacgttagggtcttcgccgatcagggggcccagcattcctcc
ctgggttcagcagacccctgtgtgaatactgaaggtggaagaggaggaggaggaggagaa
gaaggaggagaaaaagacggagggatgacaactgatcctgaccctactatctcttcctcg
ggcatctcctccaccggcttgccccggaatgagaatggagtcccctccccacccgtagac
cctcctcctcccaccactcctcatctccaccccagtccaccccagaatggagagctctgt
ggcaacccaacatcctgcccagtgacaagcacggaggcaaatgaaagcactgcaacagca
ggactgggcatagaggagagggagcaggtcaaaatcaacactaaaccaaatcagagagag
aagacacaaataaagaaatcttgccacatttccttccttttttga
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