Coregonus clupeaformis (lake whitefish): 121559825
Help
Entry
121559825 CDS
T08357
Name
(RefSeq) hypermethylated in cancer 1 protein-like isoform X1
KO
K24384
hypermethylated in cancer protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121559825
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121559825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_15
zf-C2H2_3rep
zf-C2H2_11
zf-C2H2_16
Pox_VERT_large
Motif
Other DBs
NCBI-GeneID:
121559825
NCBI-ProteinID:
XP_041728842
LinkDB
All DBs
Position
5:6310070..6322206
Genome browser
AA seq
780 aa
AA seq
DB search
MTVEVCMGESRGGELINGHDTRHESEISAVLGGGLTMMLHAMEVPSHARHLLLQLNTQRT
KGFLCDVIIVVQNALFRAHKNILAASSLYLKSLVVHDNLINLDHEMVSPGVFRVILDYIY
TGRLTEGDPSSTTEPNLGAVLAAASYLQLLDLVALCKKKLRRNGKYPVRPIPAFLPYGKM
GPSSLGLGGVGRYRVSTRVIQSCYPGGVVNTHTPRAPPLEELPPHPHASHAGELYAPTSQ
VPQVFPSTPSALPAQPSLRPAHSDRNCSPIYGLDLSKKSPNSQSQNTPSHPHLAHALPHN
DEEREGVLSGRTSPMLEANGGAYPTEKMETADQAGSLPLHSYTHLNQPLGPHLPHLHRSS
SQGPDHYPCPPSPDTPTEAGEPGREMGNIYRWVKHEPLSYTAEDEEDEEDEEEGGQNGDQ
DHQHHNHHHKAGEESDDRYRRVGCDGEDEKSGSGSEETGSSEGRPSPTGAMGRFHLPYEP
ESFGDNLYVCIPCDKGFPSSEQLNAHVETHTEEELYSGGEMGSSNSNPKNNSSNTNGNGS
LNSNSSLGSLSYLEGKSSQSLTSGVLGEIIRPYRCNSCEKSYKDPATLRQHEKTHWLTRP
YPCSICGKKFTQRGTMTRHMRSHLGLKPFACDHCGMRFTRQYRLTEHMRIHSGEKPYECQ
VCGGKFAQQRNLISHMKMHSSGGTGGALTADGKLKLDFAEGIYPLSKYAAEHLGLKQEKA
SELLAEHAMESLFPLSKLAAEHLRLSHHDKMDVLGVQALPPPQGSLSDSHSRTIDRYSPS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggaagtctgtatgggggaatcccgaggtggagaactcataaacggccacgac
accagacatgagtccgagatatctgctgttttaggtggcggtctgacgatgatgctccat
gccatggaagttccaagtcatgctaggcacctcctcctgcaactcaacacccagcgcacc
aagggcttcctgtgtgatgtcatcatcgtggtgcagaacgcgttgttccgagcccacaag
aatattctggccgccagcagcctctacctgaagtccctggtcgtccatgacaacctcatc
aacctagaccacgagatggtgagtcccggggtgttccgggtcattctagactacatctac
acgggccgcctgaccgagggagatcccagctccacaacagagcccaacctgggggccgtg
ctggctgcagctagctatctgcagctgctggacttagtggcgttgtgtaagaagaagctg
aggagaaatgggaagtaccctgttcgccccattcctgcctttctgccctatgggaagatg
ggccccagtagtttgggtttagggggagtgggcaggtatcgggtgtccacccgtgttatt
cagtcctgctatccagggggagttgtgaacacccacacgccccgtgctccaccactagag
gagctgccgccccacccccatgccagccatgcaggggagctgtatgccccaacctctcag
gttcctcaggtgttcccctccacaccctcagccctgccggcccagcccagcctgcgccca
gcccactctgacaggaactgctcccccatctatggcctggacctctccaagaagagcccc
aactcccagtcccagaacacgccctcccacccccacctggctcacgccctgccccacaat
gatgaggagcgggagggggtgctgagcggccgcaccagccccatgctggaggccaacggc
ggggcctaccccacagaaaagatggaaacggctgatcaggctgggtctctcccccttcac
tcctacacccacctcaaccagcccctggggccccacctgccccacctccaccgctccagc
tcccaaggtccagaccattacccctgccctcccagccccgacacccccacagaggctgga
gagcccggcagggagatgggcaacatctaccgctgggtgaagcatgagccactgtcatac
acagctgaggatgaagaggatgaggaggatgaggaggaagggggtcaaaacggagatcaa
gaccaccagcatcacaaccaccatcacaaggcaggggaggagagcgatgatcgctaccgt
agggtggggtgtgacggggaggatgagaagagtgggtcaggcagtgaggagacaggcagt
agtgagggtcgcccatcacccacaggggccatggggaggttccacctgccctacgagcct
gagagctttggggacaacctgtacgtgtgcatcccctgtgacaagggcttccccagctct
gagcagctcaacgcccacgtggagacccacacagaggaggagctgtactctggaggggag
atgggtagcagcaacagcaaccccaaaaacaacagcagcaacaccaacggtaacggcagc
ctgaacagcaacagcagcctgggcagcctgtcctacctggaggggaagtccagccagagc
ctgacatctggggtcctgggggagatcatcagaccctatcgctgcaactcctgtgagaag
tcctacaaggacccggccacgctgcgccagcacgagaagacccactggctgacaaggccc
tacccctgcagcatctgtggcaagaagttcacccagcgcggcaccatgacccgccacatg
cgcagtcacctgggactcaagccctttgcctgtgaccactgcggcatgcgcttcacccgc
cagtaccgcctcaccgagcacatgcgcatccactccggggagaagccctacgagtgtcag
gtgtgcgggggcaagttcgcccagcagcgcaacctcatcagccacatgaagatgcacagc
agtggtgggaccggaggggcgctgacggccgacggcaagctgaagctagactttgcggag
gggatctaccccctgagtaaatacgcagcagagcacctggggctgaagcaggagaaggcc
tctgagctgctggcagagcatgccatggagagcctgttcccgctgtccaaactggcagca
gaacacctgcgcctcagccaccatgacaagatggatgtcctgggggtccaggccctgccc
cctccccaggggtccctctctgactcccactcccgtaccattgaccgctactcccccagc
taa
DBGET
integrated database retrieval system
