Coregonus clupeaformis (lake whitefish): 121559950
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Entry
121559950 CDS
T08357
Name
(RefSeq) V-type proton ATPase 116 kDa subunit a1 isoform X1
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00190
Oxidative phosphorylation
cclu01100
Metabolic pathways
cclu04142
Lysosome
cclu04145
Phagosome
Module
cclu_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
121559950
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121559950
04142 Lysosome
121559950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121559950
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121559950
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Paralog
Gene cluster
GFIT
Motif
Pfam:
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
121559950
NCBI-ProteinID:
XP_041728950
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Position
1:24971966..25004482
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AA seq
870 aa
AA seq
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MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGMVQFRDLNPDVNVFQRKFVNEVRRCEE
MDRKLRFVEKEIKKANIPTVDTGENPEVPFPRDMIDLEATFEKLENELKEINTNQEALKK
NFLELTELKHILRRTQQFFDEMEDPALMEESSALMEGNEGGRGAPLRLGFVAGVISRERL
PTFERMLWRVCRGNVFLRQAEIEDPLEDPTTGDQVHKSVFIIFFQGDQLKNRVKKICEGF
RASLYPCPETPQERKEMAAGVNTRIDDLQMVLNQTEDHRQRVLQAAAKTMRVWFIKVRKM
KAIYHTLNLCNIDVTQKCLIAEVWCPVSDLDSIQFALRRGTERSGSTVPSILNRMTTKQT
PPTFNKTNKFTSGFQNIVDAYGIGNYREINPAPYTIITFPFLFAVMFGDMGHGVLMTCAA
LYLVIRESRILSQKTDNEMFNMIFAGRYIILLMGIFSVYTGIIYNDCFSKSLNMFGSGWS
VRPMFSPKGANWTFETLNENKVLQLDPAVPGVFNGPYPLGIDPIWNIATNKLTFLNSFKM
KMSVILGVIHMMFGVSLSLFNHLYFKKPLNIFLGFIPEIVFMASLFGYLIILVFYKWTAY
DAFTSKDAPSLLIAFINMCLFNYGDVTNKPLYRGQMGIQIVLVLIALACVPCMLIVKTMV
LRRQHLWKKHLSQKREECPAENLEQSLEQTGVSSSTGLTQQGTQKFGGVRVGNGPTEDEA
GIMDHDALSQHSEDGDEHAEEEPFDFGDVAVHQAIHTIEYCLGCISNTASYLRLWALSLA
HAQLSEVLWTMVMHLGLSSRSGGGFFGLSIIFAAFAMLTVCILLIMEGLSAFLHALRLHW
VEFQNKFYTGQGFKFVPFSFESILEGRFDE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgggggaactgttcaggagcgaggagatgacgcttgcccagctcttcctccagtctgag
gcagcctactgctgtgtcagcgagctgggagaactgggaatggttcagttccgcgatctc
aacccagacgtgaatgtgttccagaggaagtttgtgaatgaagtgaggaggtgtgaggag
atggacaggaaactaaggtttgtcgagaaggagatcaaaaaagccaacatcccaactgtg
gatactggagaaaaccctgaagtccccttccctagggatatgattgacctggaggccacg
tttgagaagctggagaacgagctgaaggagatcaataccaaccaggaagccctgaagaag
aacttcctggagctgactgagctcaagcacatcctgcgacgcacccagcagttctttgac
gagatggaggaccccgccctgatggaagagtcgtcagccctaatggagggtaacgagggg
ggccggggagcaccgctccgactggggtttgttgccggggtgatcagccgggagaggctc
cctacctttgagaggatgctgtggagagtgtgccgcggcaacgtctttttacgtcaggca
gaaatcgaggaccccctagaggaccccaccacgggcgaccaagtccacaagtcagtcttc
atcatctttttccaaggcgatcagctgaagaacagagtcaagaagatatgtgaggggttc
cgggcctccctctacccctgccccgagactccccaggagaggaaggagatggccgcgggg
gtcaacacccgtattgacgacctccagatggtgttgaaccagacggaagaccacagacag
agggtgctccaggctgcagccaagaccatgagggtgtggttcatcaaggttaggaagatg
aaggccatttaccacacgctgaacctgtgcaacatcgacgtcacccagaagtgcctgatc
gccgaggtgtggtgccctgtatctgacctggactccatccagtttgccctgcgccgagga
acggagaggagtggctccacagtgccctccattctcaacaggatgaccaccaagcagact
ccgcccaccttcaacaagaccaataagttcacctctggattccagaacattgtggacgcc
tacgggatcggaaattaccgagagatcaatccagcaccgtacaccatcatcactttcccc
ttcctgtttgcggtcatgttcggggacatgggtcacggtgtgctgatgacctgcgccgcc
ctctacctggtcatccgagagagccgcatcctctcgcagaagactgacaacgagatgttc
aacatgatattcgctggacgctacatcatcctgctgatgggaatcttctctgtctacacc
ggtatcatctacaacgattgcttttccaaatccctcaacatgtttggctccggttggagt
gtccggcccatgttcagccccaagggagccaactggacgtttgaaactctcaatgaaaat
aaggtgctgcagctggacccagccgtgccaggtgtcttcaatggcccctatccactgggt
atagacccgatctggaacattgccaccaacaagttgaccttcctcaactccttcaagatg
aagatgtctgtgatcctgggagtgatccacatgatgtttggcgtctctctcagcctgttc
aaccacctgtacttcaagaagcccctgaacatcttcctgggcttcatccctgagattgtc
ttcatggccagcctgttcggctacctcatcatcctggtcttctacaagtggacagcctat
gacgctttcacctccaaggacgcgcccagccttctcattgccttcatcaacatgtgtctc
ttcaactacggcgacgtcacgaacaagcctctctaccggggacagatggggatccagatt
gttttggtgctgattgcccttgcatgtgttccctgtatgctgatagtgaaaactatggtg
cttcggcgccagcacctgtggaaaaagcacctgtcacagaagagggaagaatgccctgca
gagaatctagagcaatctttagagcaaacaggcgtgtcctcatcaaccggactcacccaa
cagggcacacagaaatttggaggggtgcgggtgggcaatgggcccacggaggacgaagct
ggcatcatggaccacgacgcgctctcacagcactctgaggatggagacgagcatgcagag
gaggaaccgtttgactttggagatgtggcggtccaccaggccatccacaccatagaatac
tgcctgggctgcatctccaacactgcctcctacctgcgactctgggccctcagtctggcc
catgcacagctgtcggaggtgctgtggaccatggtgatgcacctgggcctatcctccagg
agcgggggcggcttcttcggcctgtcaatcatctttgcggccttcgccatgctcaccgtg
tgcatcctgctcatcatggaaggcctgtccgccttcctgcacgcgctccgtctgcactgg
gtggagttccagaataagttctacacggggcagggcttcaagttcgtccccttctccttc
gagagcatcctggaggggcgattcgatgagtaa
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