Coregonus clupeaformis (lake whitefish): 121560014
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Entry
121560014 CDS
T08357
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121560014
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121560014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
TPR_19
PAC11
Beta-prop_Aladin
DSE1_N
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
TPR_2
Beta-prop_WDR41
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
ANAPC3
Beta-prop_VPS8
TPR_BSK1_C
TPR_17
CFAP251_N
TPR_16
TRM82_WD
TPR_1
ASA1
RMD1-3
Barstar
TPR_6
CFAP70_TPR_C
TPR_9
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
121560014
NCBI-ProteinID:
XP_041728994
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MTCCEAMSAVNITRDILHRQIRDKRALGFQRQYHVTDPFINRLGLEAELQGHTGCVNCLE
WNERGDLLASGSDDQHCIIWDPFKHKKLTTMHTGHAANIFSVKFLPHSGDRILVTGAADT
KVHVHDVSVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRESSKRSEVL
IDLTEYCGQLVEAKCLAVNPQNNNYLAVGANGPFVRLYDMRMIHNHRKSASQSTSAGVHT
FCDRQKPIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQKPYTYLLPKKCQLTDVQNGKTTNGVSNGIHLPASRLRFAESKVFSGSGDLPPH
LERIKQQANDAFARQQWTQAIQLYSLGIHEASHNAMLYGNRAAAYMKRKWDGDHYDALRD
CLKALSLNPGHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDKDIKA
ALFSKMDSAEDKKGNSSIRFHTFSRKEPIPEDEVVLRERSYDYKHRYCGHCNTTTDIKEA
NFFGSKGQYIVSGSDDGSFFIWEKETANLVRILQGDESIVNCLQPHPSYCFLATSGIDPV
VRLWNPRPETESESGNGRVVEDMEGAAAANQRRMNADPLEVMLLNMGYRITGLGGRGPEG
SDDEDSSDGQVQCRPS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacttgctgtgaggccatgtctgctgtgaacatcaccagagacatcctgcacaggcag
atcagggacaaaagagcattgggcttccaaaggcagtatcatgtcacggaccccttcatc
aatagacttggactggaggcagagctgcagggccacactgggtgtgtcaactgcctagaa
tggaatgaacggggagatctgctggcatcgggctcagatgaccaacattgcatcatctgg
gaccccttcaaacacaagaagctcaccactatgcacacagggcatgcagcaaacatcttc
tctgtgaagtttctccctcactcaggtgaccgtatcctagtgacgggtgcagcagacact
aaggttcacgtgcatgatgtgtcagtcaaggagaccatccacatgttctccgaccacacc
aaccgtgtcaagcgcatcgctacggcccccatgtggcctaacaccttctggagtgctgca
gaggacggcatcatcaggcaatatgacctgagggagagcagtaagcgttcggaggtgctc
atcgacctgacggaatactgtggtcagctggtggaggctaagtgtttggctgtcaacccg
caaaataataactacctagcagtgggcgccaacgggccctttgtacgcctctacgacatg
cgcatgatccacaaccacaggaagtctgcgagtcagagcacatcagcaggagtgcacaca
ttctgtgacaggcagaagcccatcccagacggagcggggcagtattatgtcgcagggcac
ctgccagtgaagctccctgactacaataaccgcctgagggtcctggtggccacctacgtc
accttcagccctgacggcaccgagctgctagttaacatgggaggagaacaggtgtatcta
tttgacttgacgttcaaacagaaaccgtacacctatctgcttccgaaaaagtgccaatta
acagatgttcagaatggaaagacaaccaacggtgtgtcaaatggaattcacttgccagcc
agccgacttcgattcgcagaaagcaaagtcttctctggttctggtgatctgccgcctcac
ttggagcggataaagcagcaagccaacgacgcgtttgcgcggcagcagtggactcaggcc
atccagctctacagtctgggcatccacgaggccagccacaacgccatgctatacgggaac
cgtgctgccgcctacatgaagcgcaagtgggacggtgaccactacgatgcgctgagggat
tgtctgaaggccctgtccctcaaccctgggcacctgaaagcccacttccggctggcacgc
tgcctctttgagctgaagtacgtggctgaggctctggagtgcctggatgacttcaagggc
aagttccccgagcaagcccacagcagcgcctgcgacgccctggataaggacatcaaggcc
gccctcttctccaagatggactctgctgaggacaaaaagggcaacagctcgatccgtttc
cacacgttcagcaggaaggagcccatcccggaagacgaggtcgtgttgagagagcgcagc
tacgactacaaacaccgctactgtggtcattgcaacaccaccacagacatcaaggaggcc
aacttctttggcagtaaaggccagtacattgtgagcggctccgacgacggctccttcttc
atctgggagaaggagactgctaacctggtgcggatcctccagggggacgaatccatagtc
aactgcctacagcctcaccccagttactgcttcctggctaccagcggcatcgaccctgtg
gtgcggctctggaacccaaggccagagacggagagtgagagtgggaacgggcgcgtggtg
gaggacatggagggcgcggctgcagccaaccagcgacgtatgaacgccgaccccctggag
gtcatgctgctcaacatgggttaccgcatcacaggcctcggtggccgcgggccagagggc
tcagacgatgaggacagctcagacggccaggtgcagtgccggcccagctag
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