Coregonus clupeaformis (lake whitefish): 121560261
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Entry
121560261 CDS
T08357
Name
(RefSeq) 26S proteasome regulatory subunit 6B-like
KO
K03063
26S proteasome regulatory subunit T3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121560261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121560261
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121560261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
AAA_22
RuvB_N
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
CENP-F_leu_zip
NACHT
ATPase_2
AAA_3
AAA_lid_PRS2_C
IstB_IS21
AAA_7
TsaE
AAA_33
Parvo_NS1
AAA_18
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
121560261
NCBI-ProteinID:
XP_041729212
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MSLGSLRRTSHDREFNMEDIGVTVERIQDEVPAMLNSRPQTGLSFLAPEPEDLEDLYSRY
KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVG
STTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMY
ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT
AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADRE
VQRILLELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV
FSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYK
TVIKKDEQEHEFYK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgggtccttacgtagaacgtcacatgatagggaattcaacatggaggacatt
ggagtaactgttgaaagaattcaggacgaagtgcctgccatgctgaactcacgaccccag
acagggctttctttcctggccccagaaccagaagatcttgaagacctttacagcagatac
aagaagctgcagcaggagctggagtttctggaggtgcaggaggagtacattaaagatgaa
cagaagaacctgaagaaggagttcctccacgcccaagaggaggtgaagaggatacagagt
atccccctggtcatcggccagttcctggaggctgtggaccaaaacacagccatcgtgggc
tccaccacaggctctaactactatgtgcgtatcctaagcaccattgacagagagctgctg
aagcccaatgcgtcggtggcactgcacaagcacagcaatgccctggtggatgtgctcccc
ccagaggctgacagcagcatcatgatgcttacatcagaccaaaagccagatgtgatgtat
gctgacatcggagggatggatatccagaagcaggaagtgagggaagcagtggagcttcca
ctcacacactttgaactctacaaacagattggcattgacccgccaaggggggttctgatg
tacgggcctcctggctgtgggaagaccatgctggccaaggctgtggctcaccacactaca
gctgcgtttatccgcgtggtaggctctgagtttgtgcagaagtacctgggcgagggcccc
cgcatggtgcgtgacgtcttccggctggccaaggaaaacgcccctgccatcatcttcatc
gacgagatcgatgccatcgctaccaagcgttttgacgcacagaccggagctgacagggag
gttcagaggattctgctggagcttctcaaccaaatggatggctttgaccagaccgtcaac
gtcaaggtgatcatggccaccaacagggccgacaccctggaccccgccctcctgcgtccg
ggccgtctggacagaaagattgagttccccctgcctgaccgccggcagaaacgcctggtc
ttctccaccatcaccagcaagatgaacctctctgaggaggtggatctagaggactatgtt
gccagaccagacaagatctccggagcagacatcaactctatctgccaggaggctggcatg
ctggctgtccgtgaaaataggtacatcgtcctggccaaggactttgagaaggcctacaag
actgttatcaagaaggacgagcaggagcatgagttctacaagtag
DBGET
integrated database retrieval system
