Coregonus clupeaformis (lake whitefish): 121560266
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Entry
121560266 CDS
T08357
Symbol
gatb
Name
(RefSeq) glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial isoform X1
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121560266 (gatb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121560266 (gatb)
Enzymes [BR:
cclu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
121560266 (gatb)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
121560266 (gatb)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121560266 (gatb)
BRITE hierarchy
Motif
Pfam:
GatB_N
GatB_Yqey
F-112
YqeY
Motif
Other DBs
NCBI-GeneID:
121560266
NCBI-ProteinID:
XP_041729218
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All DBs
Position
3:40239384..40272263
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AA seq
554 aa
AA seq
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MAGSSAGMTALLCNMNKQIAIFYPTITSHQRHSWCVIRRICTSVSRCQSQAQTKSAPQEL
VGVVGLEIHAQIHSNTKLFSGSQVGFQAPPNSLVSFFDASLPGTLPVLNRRCVEAAVMTG
LALNCTINRKSLFDRKHYFYADLPAGYQITQQRLPIAVDGTLTYSHLGGRKRNTVVTKSV
RIKQIQLEQDSGKSLHDDYRSQTLIDLNRAGVGLMELVMEPDMSCGEEAAAAVREIQLIL
QALGTCQGNMAEGQLRVDANVSVHRPGDPWGIRTEVKNINSARNLARAIDYEIQRQMVVL
ESGGTVQNETRSSDGKTGHTIPMRDKEGLQDYRFMPEPNLPPLMVYESCSTAPPGVAPSQ
VVVLEEVRERLPELPSVRRQRLVETYGILPEHSFTLVNEDGLMDYFEAVARETKAGPRKV
IGWVMNELQGLLHQQNLSVSQSPISPQALAQLLNLQENGQISSSVAKQVFQELWKTPGKT
AQQIVKEQDLGMVNDSTEIHRICQKVVDSHPDQVQAIRGGNKKVLNKLMGLVQKETKGRA
DPVLVRAILEEKTS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctcctctgcaggaatgactgcattgctatgtaatatgaataaacaaattgca
atattttatccaacgattacttctcaccaaaggcacagttggtgtgtgataaggagaata
tgtacgtctgtctcccgatgtcagagtcaagcccaaacaaaaagtgctccccaggagttg
gtaggtgtagtgggtctggagatccatgctcagatccactccaacaccaagctgttttct
ggctcccaggtcgggttccaggctccacctaactccctggtgtccttctttgatgcctcc
ttacctggaacgctaccagtgctgaacagacgatgtgtggaggctgcagtgatgacaggc
ttggcccttaactgtaccatcaacaggaagtctctctttgacaggaaacactacttctac
gctgaccttcctgcaggctaccagatcacccaacagaggctgcccatcgcggtggacgga
accctgacctacagtcacctgggcggccgtaagaggaacacagtggtcaccaagagtgtc
aggatcaaacagatccagctggagcaggacagtggcaaaagcctccacgatgactacagg
agccagacccttatagacctcaacagagcaggtgtgggactgatggagctggtgatggag
ccagacatgagctgtggagaggaggcagcagcagccgtcagagagatccagctcatactg
caggctctagggacctgccagggaaacatggctgagggccagctgagagtggatgccaac
gtgtccgtccacagacctggggatccttggggcatcaggactgaggtcaagaacatcaac
agtgcccgcaacctggccagggccatagactatgagatccagagacagatggttgtccta
gagagcggcggcacagtgcagaatgagacacggtcgtctgatggcaagactggtcacacc
attccaatgagagataaggagggccttcaggactataggttcatgccggagcccaacctg
cctcctctgatggtgtacgagtcgtgctctacagccccccctggtgttgcccccagccag
gtggtggttctggaggaggtgagggagaggctgccggagctgcccagcgtcaggaggcag
aggctggtggagacctacggcatcctccccgaacacagcttcactctggtgaatgaggac
gggctgatggactactttgaggccgtcgccagggagaccaaggctgggccaagaaaggtg
attggctgggtgatgaacgagctgcagggcctcctccatcaacagaacctgagtgtcagc
cagagtccgatctctcctcaagctctagcccagctactgaatctccaggagaatggacaa
atctcttcttctgtcgccaagcaggtgttccaggagctgtggaagaccccaggtaaaacg
gcccagcagatcgtcaaggagcaggacctggggatggtcaacgacagcacagagatccac
aggatttgccagaaggtggtagactcacacccagaccaggtccaagccatccgcggtggg
aacaagaaggttctgaacaagctcatgggtctggtccagaaggagactaaaggcagggct
gacccagtcctggtacgggccatcctggaggagaagacctcctga
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