Coregonus clupeaformis (lake whitefish): 121560496
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Entry
121560496 CDS
T08357
Name
(RefSeq) iroquois-class homeodomain protein irx-4-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121560496
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121560496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121560496
NCBI-ProteinID:
XP_041729388
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESSGRSIADSGVTASAQTPVYCPVYESRLLASA
RHELSSAAALGVYGNPYTGSQSYGNYVTYGTDASAFYSLGTFDNKDATEPAHARITQAAA
YYPYDPTLGHYQYDRYGCMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRYNEDDEGSQEENINSENNDDEK
DKDLALSDLEDFDMIESESSECELKHQYLMNTHMTTTDCSNDHLKDTSLKISIPVSLGGE
QQLSKTSPEDCDSRQGKACYQQQGDQILDGKPRIWSLAQTATSLNQAEYPSCMLRCQPGL
PASPAASSPITVLDRRQDSPVTTLRNWVDGVFHDPLFRHSTLNQALTNTTVSWTTTTKGS
ILETGALEHSVGSIKGLPSLQHQDATKDNMNFPKTANKLFCS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaattcggatatccctactcgtctgcaccacaattcctcatgacaacc
aactctttgacaacttgctgcgagtcaagcggcagaagcatcgctgactccggggtgaca
gcctccgcccagacgccggtctactgcccagtgtacgagagccggttgttggccagcgcc
aggcacgagctgagctccgcagcggctctgggggtgtatgggaacccgtacaccgggagt
caaagctatggaaattacgttacttatggaaccgacgcgtccgctttctactcgctgggg
acattcgataacaaagatgcaacagagcctgcgcatgcgaggataacccaggcagcagct
tactacccctatgaccccactctgggacattatcaatacgacagatatggctgtatggac
ggagggaccaggaggaagaacgccacccgagagacaaccagcaccctgaaggcctggcta
caggagcacaggaagaacccctaccccaccaagggagagaagatcatgttggccatcatt
actaagatgaccctgacgcaggtgtccacctggttcgccaacgccaggaggaggctgaag
aaggagaacaagatgacgtggcctccgaggaacaagtgttctgatgagaagagatataat
gaagatgatgagggttctcaggaggagaacatcaacagtgagaacaacgatgatgagaaa
gataaggatctcgcgctgagtgacctggaagacttcgacatgatagaatcagagagctcg
gagtgcgagctcaaacaccagtacctcatgaacactcacatgacgacgactgactgttcg
aacgaccatctgaaggacacatctttaaagatcagcattcccgtgtccctgggcggggag
cagcagctcagtaaaacctcaccagaggactgcgacagccggcaggggaaagcctgctac
caacaacagggcgaccagatactggacggcaaaccacggatctggtcgttggcccagacg
gccacgtctctgaatcaggcggagtacccgtcctgtatgttgaggtgtcagccgggcctg
cccgcctctccggccgcctcctcccctatcacggttctagacagacggcaggactctccc
gttacaactctcagaaactgggtggatggggttttccacgacccgttgttcagacacagt
actttgaaccaggccctgaccaacaccacggtgtcgtggaccacgaccaccaagggctcg
atactagagaccggcgctctggaacattctgttgggagcatcaaaggacttccgtctcta
cagcaccaagacgccacgaaggacaatatgaattttcctaaaactgccaacaaactcttc
tgctcttaa
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