Coregonus clupeaformis (lake whitefish): 121560742
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Entry
121560742 CDS
T08357
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121560742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121560742
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121560742
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
121560742
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121560742
Exosomal proteins of other body fluids (saliva and urine)
121560742
Exosomal proteins of colorectal cancer cells
121560742
Exosomal proteins of bladder cancer cells
121560742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
121560742
NCBI-ProteinID:
XP_041729598
LinkDB
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Position
17:complement(51517863..51523504)
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AA seq
219 aa
AA seq
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MFHGIPVAGAPANKPELYEEIKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKDCVTP
NEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIKDDKG
NLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDNEAKDKVTLW
LTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacggaatacctgtcgcaggagctcctgccaataaacctgaattgtatgaggaa
ataaaattgtacaagaatgccagagaaagagagaagtttgacaacatggcagagctgttt
gctgtggtgaagacacttcaggccctggagaaagcttacatcaaagactgtgtgactcct
aatgagtacacggctgcttgctccaggctgctggtgcagtacaaggctgctttcaaacag
gtccagggatctgacgtgggttctatcgatgacttctgcaggaagtacagacttgactgc
ccgctagctatggagagaatcaaggaggatcgtccaatcaccatcaaggatgacaagggc
aacctgaatcgctgcattgccgatatcgtatcgctctttatcacggtgatggacaagcta
cgtctggagatccgggccatggatgagatccaaccagacctgagagagctgatggagacc
atgaacagaatgagcaacatgcccccagacaatgaggccaaggacaaagtcaccctctgg
ttgaccactctcagcagcatgtcagcctctgatgagctggacgactcccaggttcgccag
atgctgtttgacctggagtccgcctacaacgccttcaaccgcttcttacactcctcctaa
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