Coregonus clupeaformis (lake whitefish): 121561302
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Entry
121561302 CDS
T08357
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121561302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121561302
03036 Chromosome and associated proteins [BR:
cclu03036
]
121561302
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121561302
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121561302
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
121561302
NCBI-ProteinID:
XP_041729828
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MFSPRPTPSSGRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSEALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPTSEFAYCADLISISSPSPLETATVQSISVMAVAPEGTARFWPSLAHEGSYTETV
VDMGENLCNFVVAVRGGSFIVSSYRGQLLRLRADPSGKLLQRALQQGQGVLSGIGRRVSS
LFGMLAPLTNNNLHSVLWVGETGCLYTLTSCGLSKWEVDEVTEHQVLSWDSSRALRESVA
DAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAATWHPSDSPCLAYFCLVTLLDNGNN
ISEELSVEVTKYNPPFQSEDALQAMRLVLPRASSPAAFLYNEELVFACSTGTGRGGLPEE
KIPFNTPGDHLRGGGCCANLPVFFSQNSGLVAVVARESASMLPETMEDSLYSSLAGAGPE
ATAMETPTRMEPVAQEDKTKLLKAAFLQFCRNDLVGAQTMTDELFPPEGDGDGEVGGDLD
LVVTRINLDLVDDYPASDPRWAESVPDENSGFPLTSLIILHQLEDKMKAHGCFMDFLLQV
GLLDRLGQTAVRSSPMATRLLLCEHAEKLQAAMTLKNHHTKNSELVNRAILTALRKSDAT
VSTSLTAADVFFREVSQISSVFECLLEEEERTLKENPVDSVKWAEVVLSVNTIIKEMLQA
AGQYRDTKASLYRASESAPAEPEYIPWTASSGLGGVRTVIARQHEVILRDVYPHADSELR
NGLNEQLAALLDVLLGGYVAQLTSLRPGRPGQQDRYNTLEMEYTQRRSELLAPLLELGQY
QWVAALAEKYCDFDILVQMCELTDNQNRLQHYMAKFADQNFADFLFRWYMEKGKRGKLLS
QPVAQHQQLASFLQSHEHLSWLHHIHVHDFSSAHKTLYDQANMETRYFVKKKTLLALSKL
TALASDMPEAVLKKRVDDMVEQERFLLHQETLPKQLLEEKQQSPDTMPLLSAHNLIHLYI
CDDNRRANEYDFKKALDLLEYIDEEDAVDIAGLKCEIFCKALKKDDWSSADGNDDPLEAA
KDSIFVKILLKLIQEGVPLQTYLPDVKDLLQVDEMEALKSKPTFEFVLRANYEHYLQAQI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccctcgtcccacccctagttcaggccgaaggcagtcctcaagggtcaccggt
agaaagagtctcgccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgcgatcaactcccacgcgtgtgcagagttactcaacttcagaagcactccacttc
gatgtccagacgtttggctcttctctacctgtcaaagtcatggaggctttgacaatggct
gatgccgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgtcagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccactagtgagtttgcctactgtgctgatctcatctccatatca
tctcccagccctctggagactgccactgttcagtctatctctgtcatggcggtggctccg
gagggaacagcccggttctggcccagtttggcccacgaggggagttacactgagactgtg
gtcgacatgggcgaaaacctctgcaactttgttgtggctgtcagggggggtagtttcatc
gtgtcctcctataggggccagttgttgcgtctcagggcagacccttccggaaagctgctg
cagagggcgctacagcagggtcagggggtgctttccggcatcggacgccgcgtctccagc
ctctttggcatgcttgccccgctcaccaacaacaatctccacagtgttctgtgggtggga
gagacaggctgcctgtatactctgacctcttgtggtctcagtaaatgggaggtggatgag
gtcacagagcaccaggtcctcagctgggactccagccgcgctctgagggagagtgtcgcc
gacgccatctgggggtcagagagcaactatgaggaaatcaaggagggagtaaacgttacc
tacatggacatgcagctcagccaggatggcctggtagtgttggcagcaacctggcaccct
tcagattccccctgcctggcctacttctgcctggtcaccctgctggacaacggcaacaac
atctctgaggagctctctgtggaggtcaccaagtacaatccccccttccagagtgaggat
gccctccaggccatgaggctggtgttaccacgggcctccagccctgctgccttcctgtac
aacgaggagctggtgtttgcctgctccaccggtacaggcagaggaggtctacctgaggag
aagatccccttcaacacacctggtgaccatctgcgtggtgggggctgctgtgccaacctg
ccagtgttcttctcccagaacagtggtctggtggccgtggtggccagggagagtgcctcc
atgctgcctgagaccatggaggactccctctactcctccctggctggggccggccctgag
gcaactgctatggagactccgactaggatggagcctgtagcgcaagaggataaaaccaaa
ctcctaaaagcagcattcctgcagttctgccggaatgatctggtgggggcccagaccatg
acagacgagctgttccccccggagggggacggagacggggaggtgggcggggatctggac
ctggtggtgacccggatcaacctggacctggtggacgactacccagcctcagacccccgc
tgggccgagtctgtccctgacgagaattctggcttccccctgacctccctcatcatcctc
caccagctagaggacaagatgaaggcccacggctgcttcatggacttcctgctacaggtg
ggtctcctggaccggctgggccagaccgcagtgcgctcatctcccatggcgacgcgcctg
ttgctgtgcgagcacgccgagaagctacaggcggccatgacactgaagaaccaccacacc
aaaaacagcgagctggtcaatcgcgccatcctcactgccttgaggaagagcgacgcaacc
gtgtccactagcctcacggctgcagacgtcttcttcagagaggtgtctcagatctcctca
gtctttgagtgtctactagaagaggaggagaggactctgaaggagaaccctgtggattca
gtgaagtgggctgaagtggtgctcagtgtcaacaccatcatcaaggaaatgctgcaggct
gctggtcagtacagagacaccaaggcctcactgtacagagcctcagagagcgcccctgct
gaaccagaatacatcccatggaccgcctctagcggtctgggcggggtgcgcaccgtcatc
gcccgccagcacgaggtgatcctgcgcgacgtgtaccctcacgccgactcggagctgcgc
aacggcctgaacgagcagctggcggcgctgctggacgtgctcctgggaggctacgtggcc
cagctgacctcactgagaccgggccggccgggccagcaggaccgctacaacaccctggag
atggagtacacgcaacgccgctctgagctgctcgcaccactgttggagctgggtcagtac
cagtgggtggcggcgctggcagagaagtactgtgactttgacatcctggtccagatgtgt
gagttgactgacaaccagaacagactgcagcactacatggccaagtttgccgaccagaac
tttgcggacttcctgttccgctggtacatggagaaggggaagcggggcaagctgctctcc
cagcccgtcgcccagcaccagcagctggccagcttcctgcagtcccatgaacacctcagc
tggctgcaccacatccacgtccatgatttcagcagcgcccacaaaaccctgtatgaccag
gccaacatggagacacgttactttgtgaagaagaagaccctgttggctctcagtaaactg
actgccctggcatcagacatgcctgaggctgtgttgaagaaacgagtagatgacatggta
gagcaggagcggttcctgctgcaccaggagactctgcccaaacagctgctggaggagaaa
cagcagagcccagacaccatgcccctgctcagcgctcacaaccttattcatctgtatatt
tgtgatgacaaccgacgagccaatgagtatgacttcaagaaggctcttgatctgctggag
tacatagacgaggaggacgcggtggacattgcgggactcaagtgtgagatcttctgcaag
gccctcaagaaagatgactggtcgtctgctgatgggaatgatgaccctctggaggcagcc
aaggacagcatctttgtcaagatcctcctcaagctcatacaagaaggcgttcctctacag
acctaccttcctgatgtcaaagaccttcttcaggtggacgagatggaggctttgaaatca
aagcccacttttgagtttgtcctgcgggccaactatgaacattacctgcaagcacaaatc
tga
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