Coregonus clupeaformis (lake whitefish): 121561383
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Entry
121561383 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169 isoform X1
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121561383
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121561383
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121561383
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121561383
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
121561383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-RING_2
zf-RING_UBOX
zf-RING_10
zf-RING_4
zf-RING_5
LAG1-DNAbind
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121561383
NCBI-ProteinID:
XP_041729890
LinkDB
All DBs
Position
5:complement(7429743..7439974)
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AA seq
652 aa
AA seq
DB search
MKMAATGSARSTSGLGHKCKTRPADMLKTRTPSQLLTLEEARCPVCSEILLEPVTMPCSH
SVCLHCFKRTVEFTSLCCPLCRLRVSSWARKQSREKSLVNIELWEMVRKSYPQRCKRRME
QRDCETGGEEIFRTPAQVSGEIRLEYGKQKVKVPMNEEKEEGRRKVLHHREGCGTLKRFQ
DPFYGLLSDSENEEPIGKRTRNVSAFVRRTKISAGLQTNVVQRSQSCTDTEEGRRKIRLS
THLPGLDKASIAHSYNAGILLSSENSRSLSAPIIVQDKRHSWRGVIMASSTPFMVPQSKQ
ERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVMEPTIVKSTPRNLFRSLQRLTS
YEASPTILQKWKQIEVDRQSVKVTSKGTLTSPMNEDLVFKPSPIEEKHGKPCSCAPAANK
GKEHLGMCAKTDSSGQENERTCIHNKRRLIFDQAIGETTFHQKQFTKFHTPFVALTSEET
VKECGVSSESVVVPESHCGPTSIHQNLTLVPHDMNASVRSCKLKSKDSQDQRKELDNRNC
AQNQPTSRRGKKRSQKTKHLEETESGLKRPISQSQDGFNIECAQTDLYIQQVQQEREDRE
LALNLQRQFDREQQQIDKQKTSPDKYFLRSCMSSENIIKSNPRRSGRISKNN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcggcgacaggttccgccagatccactagtggattgggtcacaaatgcaaa
accaggcccgcagatatgctgaaaactcggacaccttcacagctgctgaccctggaggag
gcaaggtgtccggtttgttcggagattttattagagcccgtaactatgccatgtagccac
tcggtgtgtctgcactgtttcaagcggacagtggaatttaccagtttgtgctgtcccctc
tgccggctgcgagtatccagctgggcccgtaaacagtcccgggagaaaagcctagttaac
atcgaactctgggaaatggttagaaagagttatccacaacgatgcaagaggagaatggag
cagagagactgtgagactggtggagaagagattttccgcacgcctgctcaggtatcagga
gagatccgactggagtatggaaagcaaaaagtaaaggtaccaatgaatgaagagaaagaa
gaggggaggaggaaagtcctccaccacagagagggatgtggaactctcaagcgctttcaa
gatcctttctatgggttgctgtcagactcggagaatgaagaacccattgggaagagaacc
agaaatgtttctgcgtttgttagaagaacaaagatctcagcaggtctacagaccaatgtg
gtgcagagaagccagagctgtactgatacagaggagggaaggcgaaaaataaggttgtct
actcatcttcctggactggacaaggcaagtattgctcacagctacaatgcaggaatcctt
ctgtcctctgagaacagccgatctctttcggcacccatcattgtccaagacaagaggcat
agctggcgaggtgtcatcatggcatcatcaacaccttttatggtcccccagtcgaaacag
gagaggtccattagccctgagagcaatgacagtatctctgaggagctgaatcacttcaag
ccaatagtgtgctcgccgtgcaccccaccaaagcgactacctgacggccgagtgatggaa
cccacaattgtgaagtccaccccccggaacttattccgcagcctgcagaggctcaccagc
tatgaagccagccctacaatcctccagaaatggaagcagatcgaggtggaccgtcagtct
gtcaaagtgacctcgaagggcaccttgaccagccccatgaacgaggaccttgtcttcaaa
ccaagccccatagaggagaagcacggcaagccctgtagctgcgctccagcagcaaataag
ggaaaagaacacttgggtatgtgtgccaagactgattcctctgggcaagagaatgaaaga
acttgcatacataataaacgaagactgatatttgaccaggccattggagagaccaccttc
catcaaaaacaattcacaaagtttcatactccatttgtagctttaaccagtgaggagact
gtaaaagaatgtggggtttcttctgagtctgtggtggtacctgaatcacattgtggacca
acttcaattcatcaaaatctgacattagtcccacatgatatgaatgccagtgtaaggagt
tgcaaacttaaatcaaaggactcacaggatcagaggaaagagttggacaatagaaactgt
gcccagaaccaacctacctcaaggaggggcaagaagaggagccagaagaccaaacacctg
gaggagacagagtctggactcaagaggccaatatcacagagccaagatggtttcaatata
gagtgtgcacagactgacctgtacattcaacaggtacagcaagagagagaggacagagag
ctagcgttgaatcttcaaagacagtttgacagggaacagcaacaaatagacaagcaaaag
accagtcctgacaagtactttctccggtcctgcatgtccagtgaaaacataatcaaatcc
aatccacgcagatcaggaagaatttccaaaaataattag
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