Coregonus clupeaformis (lake whitefish): 121561495
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Entry
121561495 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121561495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121561495
03036 Chromosome and associated proteins [BR:
cclu03036
]
121561495
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121561495
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121561495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
WH_MCM3_C
NACHT
DUF2310
Motif
Other DBs
NCBI-GeneID:
121561495
NCBI-ProteinID:
XP_045074099
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MRHADAHARLVVDWLESIAKDEIGDFSDNIEYYAKSVYWENTLHALKQRRNASSTGFNVP
LVTELDPDAPIRQKRPLADLDRENDARLLKYLFTLLRAGMTDEAQRLCKRCGQAWRAATL
EGWKLYHDPNINGGGAELLPVEGNPHRCLWKVCCWRMADDEHVSRYERAIYAALSGNLKR
LLPVCESWEDSVWAYFRVLVDSLVEQEVRSSGMGSEELEELPQEYLEANWTLEKVFEELL
ATESKKVLEETKEHYHIIQKLVILGDLDGLLEEFSNWLTRSPALPSHLLLFYRSLGMQLK
EEVSVDVLKAYVSLLMREKQVDLIAFYVSHLPSDIATAQYAHFLEEVTEANQRQRCLELA
RRQVSLDVAAVTKMVMENIXERDTEEFAHHDLTPALDTGTSVEDQRKIDPIDWLVFDPAQ
RAEALKQSNAIMRKFLASKKHDAAKEVFGKVPEDSMREIYSQWEELGLDTPLPAEDENAI
REHLCIRAYLEAHEAFNEWFHHMNSPPQKPSPPAQAKFTEKVAFEMKEKEYQMEHDNWTG
RLEALTEDVKERIYNVLLFVDGGWMVDVREDTEEDPERGHQMVLLRRXCLPMMSFLLQTV
LQRTQRHQESLRLADIIASDQHRLYEVFSKDELRKFLQKMRESSLLLLDKSLDPLGYEIQ
P
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcggcacgcggacgcgcatgcccggctggtagtggattggttggagagtatcgccaaa
gatgaaatcggggacttctctgacaacattgaatactacgccaagtctgtgtactgggag
aatacccttcatgctctgaaacagaggagaaacgcatccagcacaggcttcaatgttccc
ctggttactgagctggaccctgacgcccccatcagacagaagcgtcccctggcagacctg
gacagagagaatgacgccaggctgctgaagtacctgttcaccctcctcagagcgggcatg
actgacgaggcccagaggctttgtaagcgctgtggacaggcatggagggctgctactctg
gaggggtggaagctttaccacgaccccaacatcaacggaggcggtgcagagctgctacca
gtggaggggaaccctcaccgctgtttatggaaggtgtgctgctggaggatggctgacgac
gaacacgtcagcagatatgagagagccatctacgctgctctgagtgggaacctcaaacgg
ctgctcccagtgtgtgagtcgtgggaggacagtgtgtgggcctacttcagggtcctggta
gactctctggtggaacaggaggtcaggtcctcaggaatgggcagcgaggagctggaggag
ctgccacaagaatacctggaggccaactggacactagagaaggtgtttgaggagctgtta
gcaacagagtcaaagaaagtcctggaggagactaaagaacattaccacatcatccagaag
ttagtcatcctgggagacctggatggtctcctggaggagttcagtaactggttgaccagg
agtccagctctgccctctcacctgttgctgttctaccgtagcctgggcatgcagctcaag
gaggaggtgtcggtggatgtcctgaaggcctacgtctctctgttgatgagggagaagcag
gtggatctgatcgccttctatgtcagtcacctgccgtcagacattgccaccgcccagtac
gctcacttcctagaggaggtcactgaggctaaccagagacaacgctgtctggagctggcc
aggaggcaggtcagtctggacgtggcagcggtcactaagatggtgatggagaacatcnna
gagagagacactgaggagttcgctcatcatgacctcacccctgcactggacactggcacc
tcagtggaggaccagaggaagattgatcctattgattggctggtgtttgaccccgcccag
agagctgaggccctcaaacagagcaacgccatcatgaggaagttcctggcctctaagaaa
cacgatgcagccaaggaggtgtttggtaaggtcccagaggactcaatgagggagatatac
agccagtgggaggagctaggcctggacacgccccttcctgcagaggatgagaacgccatc
agggaacacctgtgtatccgcgcttacctggaagctcatgaggcgttcaatgagtggttc
catcacatgaactccccccctcagaagcccagccccccggcccaggccaagttcactgag
aaggtggccttcgagatgaaggagaaggagtaccagatggaacacgacaactggaccggc
cgtctggaggctctgactgaagacgtgaaggagagaatctacaacgtcctgctgtttgtg
gacgggggctggatggtcgacgtcagagaggatacggaggaggacccagagagaggccac
cagatggtgctgctccgtagannctgtctgcccatgatgtccttcctgttgcagacagta
ctgcagagaacacaacgccaccaggagagtctcagactggctgatatcatcgcctcagac
caacaccgcctctatgaggtgttctccaaagatgagctgaggaagttccttcagaagatg
agggagtcgtctcttctcttattggataagagtctggacccgctggggtacgagatccaa
ccataa
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