Coregonus clupeaformis (lake whitefish): 121561498
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Entry
121561498 CDS
T08357
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145
Phagosome
cclu04210
Apoptosis
cclu04530
Tight junction
cclu04540
Gap junction
cclu04814
Motor proteins
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121561498
09143 Cell growth and death
04210 Apoptosis
121561498
09144 Cellular community - eukaryotes
04530 Tight junction
121561498
04540 Gap junction
121561498
09142 Cell motility
04814 Motor proteins
121561498
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121561498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121561498
03036 Chromosome and associated proteins [BR:
cclu03036
]
121561498
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121561498
04147 Exosome [BR:
cclu04147
]
121561498
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121561498
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121561498
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121561498
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121561498
Exosomal proteins of other body fluids (saliva and urine)
121561498
Exosomal proteins of colorectal cancer cells
121561498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121561498
NCBI-ProteinID:
XP_041729975
LinkDB
All DBs
Position
23:complement(50335453..50339309)
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AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttctatgcatgtgggccaagccggagtccagatgggcaacgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagcgacaag
acctgtggaggtggagacgactcattcaacaccttcttcagtgagaccggagccggaaag
catgtcccacgtgccatcttcgttgatctggagcccactgtcatcgatgaggtgaggaca
ggtacctatcgccagctgttccatcccgagcagctcattacgggtaaggaagatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgacctggttctggac
aggacacgcaaactggctgaccagtgcactgggctccagggattcctcatcttccacagc
ttcggaggaggcactggctctggtttcacctccctgctgatggaacgtctgtctgtcgac
tacggaaagaagtctaagcttgagttcgccgtttacccagctccccaggtgtccacagct
gtggtggagccatacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgcaggaacctcgacattgag
cgtccctcatacaccaacctcaacaggctcattggccagatcgtctcctccatcactgcc
tccctgcgattcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccagtcatctccgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgcttcgagccagccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaggatgtcaattctgccattgctgccatcaagaccaaacgtacc
atccagtttgtggactggtgtcccactggcttcaaggtggggatcaactaccagccccct
acggcggttcctgggggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggcccgtctggaccacaagtttgacctgatgtacgcc
aagcgggcctttgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggattatgaagaggtggggactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa
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