KEGG   Coregonus clupeaformis (lake whitefish): 121561498
Entry
121561498         CDS       T08357                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145  Phagosome
cclu04210  Apoptosis
cclu04530  Tight junction
cclu04540  Gap junction
cclu04814  Motor proteins
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121561498
  09143 Cell growth and death
   04210 Apoptosis
    121561498
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121561498
   04540 Gap junction
    121561498
  09142 Cell motility
   04814 Motor proteins
    121561498
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121561498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121561498
   03036 Chromosome and associated proteins [BR:cclu03036]
    121561498
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121561498
   04147 Exosome [BR:cclu04147]
    121561498
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121561498
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     121561498
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    121561498
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121561498
  Exosomal proteins of other body fluids (saliva and urine)
   121561498
  Exosomal proteins of colorectal cancer cells
   121561498
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 121561498
NCBI-ProteinID: XP_041729975
LinkDB
Position
23:complement(50335453..50339309)
AA seq 450 aa
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttctatgcatgtgggccaagccggagtccagatgggcaacgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagcgacaag
acctgtggaggtggagacgactcattcaacaccttcttcagtgagaccggagccggaaag
catgtcccacgtgccatcttcgttgatctggagcccactgtcatcgatgaggtgaggaca
ggtacctatcgccagctgttccatcccgagcagctcattacgggtaaggaagatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgacctggttctggac
aggacacgcaaactggctgaccagtgcactgggctccagggattcctcatcttccacagc
ttcggaggaggcactggctctggtttcacctccctgctgatggaacgtctgtctgtcgac
tacggaaagaagtctaagcttgagttcgccgtttacccagctccccaggtgtccacagct
gtggtggagccatacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgcaggaacctcgacattgag
cgtccctcatacaccaacctcaacaggctcattggccagatcgtctcctccatcactgcc
tccctgcgattcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccagtcatctccgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgcttcgagccagccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaggatgtcaattctgccattgctgccatcaagaccaaacgtacc
atccagtttgtggactggtgtcccactggcttcaaggtggggatcaactaccagccccct
acggcggttcctgggggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggcccgtctggaccacaagtttgacctgatgtacgcc
aagcgggcctttgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggattatgaagaggtggggactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa

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