KEGG   Coregonus clupeaformis (lake whitefish): 121561619
Entry
121561619         CDS       T08357                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121561619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121561619
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     121561619
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT BRCT_2 DUF2464 F5_F8_type_C
Other DBs
NCBI-GeneID: 121561619
NCBI-ProteinID: XP_045072155
LinkDB
Position
Unknown
AA seq 444 aa
MPEIKLKHVVSCSTEDNTHKADNLLSSDTYRKWKAARPGEKQTSVIIQFEKEEQVHSIDI
GNEGSAFIEVLVGHSTSVKDQDYEVLLVTSSFMSPTESRNGTNTNRVRFFGPNQLVKAQA
QEKWDRVKIVCSQPYNKSIAYGVAFVKFHSPPDKSDPPTTTPPKLTKLGQFRMKDESPLA
GPSLQPGSLFFNRESTSKPSPALKISPQTEKLSYAAAALQSGLGLVTQQPHRPPTLPHHR
GSEMDHSFKQEAMLLTYKCVHISAPVKRKFEFSKERSLSPTPPPSKKPSPMGSPERGTTT
PKPKAKSSTATTPSPSTAKASPAQKTPDIKKKESLSKPEAKTRPKPSKAQSSSSEAPVSL
NKIMEGVVFVLSGFQNPFRGDLRDKALAMGAKYRSDWTPDATHLICAFSNTPKYSQVKSA
GGIIVRKEWVLDCHKRKQKISFKR
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgccggagataaaactcaagcacgtcgtgtcttgcagcaccgaagacaatactcacaag
gctgacaacctgctgagctcagacacatacaggaaatggaaagcagcaaggccaggggag
aaacaaacctcagtcattatacagtttgagaaagaagagcaggtgcacagcatagacata
ggaaatgaagggtctgcttttatcgaggtgctggtgggacactcaacctctgtcaaagac
caggactatgaggttctgctggtcacgtcctccttcatgtcccccacggagagccgtaac
ggcaccaacaccaaccgtgtacgcttctttggccctaaccagctggtgaaggctcaagcc
caggagaagtgggaccgcgtgaagattgtgtgtagccagccgtacaacaagagcatagca
tacggagtggcctttgtgaagttccattcaccaccagacaaaagtgatccaccaaccaca
acacccccgaagttgaccaagctgggccagtttcggatgaaggatgagtcccccttggct
ggccccagtctacagccaggcagcctcttcttcaacagagagagcacctccaaacccagc
ccagcgctcaagatttcgccacagactgagaagctcagctatgcagctgccgccctgcag
tctggtctgggtctggtcactcaacagccccaccgtcctccaactctcccccaccacaga
ggctcagagatggatcattctttcaagcaagaggcgatgttactcacttataaatgtgtt
cacataagtgcaccagtgaagaggaagtttgagttcagtaaagagcgcagtctgtccccc
actcctcccccctcaaagaaacccagccccatgggctcccctgaacggggcactaccacc
cccaaacccaaggccaaatccagcacagccactactcccagccccagcactgccaaagcc
tcccctgcccagaaaaccccagacatcaagaagaaggagagcctgtccaagccagaagcc
aagaccagacccaagccctccaaagcccagtccagctcctccgaggcccccgtctccctc
aacaagatcatggagggggtggtgtttgttctgagcggcttccagaaccccttccggggg
gacctgagggacaaggccttggccatgggggccaagtaccgctccgactggacccccgac
gccacacacctcatctgtgccttctccaacacccccaagtacagccaggtgaagtcagca
gggggcatcatcgtccggaaggagtgggtgctagactgccacaagaggaagcagaagatc
tccttcaaacggtaa

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