Coregonus clupeaformis (lake whitefish): 121561623
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Entry
121561623 CDS
T08357
Name
(RefSeq) eukaryotic translation initiation factor 2A
KO
K15026
translation initiation factor 2A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121561623
03012 Translation factors [BR:
cclu03012
]
121561623
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121561623
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
eIF-2A
121561623
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Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
121561623
NCBI-ProteinID:
XP_041730108
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All DBs
Position
5:20404863..20411853
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AA seq
581 aa
AA seq
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MAPPTPHLAVRGSDGTVLLRGPPNCEKNADFQRDPLQSKYVAFSKDGTLFAWCNGEKVTV
VKVADGSQVRLFDLPKTTMLEFSPLNTVLATWQVYSKTQDNPQGDANLQLWDLQTGTCLK
ALYQKKVQGWCPSWSDDEKIAVRSVNNELHFFENNDFITIANKLHLQKVSEFMLSPGSQP
SKVAVYVPGSKGAPSFVRLYQYPNFGGPTCALANKSFFKADRVTMLWNKKATAVLVQASI
EVDKTGASYYGEQTLHYLATNGETSAVQLQKNGPIYDVAWSPSSTEFCVVYGFMPAKATV
YNLKCDPVFDFGTGPRNAIYYSPQGHILVLAGFGNLRGQMEVWDVKKWKQVSKPQAPDST
HFAWCPDGEHIVTSTCAPRLRVSNGYKIWHYTGTVLYKQDTPTGTELWETVWQPFPDGTF
PERPVKYQAAPSELGSTEAKPAQAYRPPALRNKPVTASSKLHEEEPPQNMRPGATGDKQL
SKTALKNQKKREAKKAAKQEINPDALEPQSDPSPASSAQPEPSCGDPETDKKIKNVKKKL
KAIDELKALQATGKPIQKNQLEKMEKEAQLMKELEDLQLGV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccccacacctcatttagcagtccggggatctgacgggacagtgctgctccgt
ggaccaccaaactgcgaaaagaatgcagattttcaaagggaccctctgcaaagtaaatat
gtggctttcagcaaggacgggacattgtttgcatggtgcaatggagagaaggtcactgtt
gtgaaggttgcagatggctctcaagtcaggttgtttgaccttccaaagactacaatgttg
gagttctctccactgaacactgtgctggctacatggcaggtgtatagcaagacacaagac
aacccacagggagatgccaacttgcagctgtgggatttgcaaactgggacctgcctcaag
gctctctaccagaagaaggtacagggatggtgtccaagctggtcagatgacgagaagatt
gcagtcaggagtgttaacaatgaacttcacttttttgagaacaatgactttatcaccatt
gccaataagctgcacttgcagaaggtgtccgagtttatgctgtcccctggaagtcagcct
agtaaggtggctgtttatgtccctgggagcaaaggtgccccctcgtttgtccggctatac
cagtaccccaactttggtggcccgacctgtgctctggccaacaagagtttctttaaggcc
gacagggtgaccatgctgtggaacaaaaaagccactgcggttctggtgcaggccagcata
gaggtggataaaacaggggcctcatactacggagaacagactttacactacttggccacc
aatggggagacttctgcggtgcagctacagaagaacgggcccatctacgacgtggcatgg
agccccagctccaccgagttctgcgtggtctatggcttcatgcccgctaaggctactgtc
tacaacctcaagtgcgaccccgtcttcgacttcggcacgggcccccgcaacgccatctac
tacagcccccagggccacatcctggtcttggccggcttcgggaacctgcggggccagatg
gaggtgtgggatgtcaagaagtggaagcaggtgtccaagccccaggctcccgactccacc
cacttcgcctggtgcccggacggtgaacacatcgtcacatcgacctgtgccccccggcta
cgtgtcagcaacggctacaagatctggcactacaccggcacggttctgtacaagcaggac
acgccaacgggcacagagctctgggagactgtgtggcagcccttcccagacgggacgttc
cctgagaggccggtaaagtaccaggcagcacccagcgagctgggcagcacagaggccaag
ccggcccaggcctaccgcccacctgccctgcggaataaaccggtcacagccagctccaaa
ctgcatgaagaggagcctccacagaacatgaggcctggcgccaccggggacaagcagctg
tccaagacggctctgaagaaccagaaaaaacgagaggcaaagaaagcagccaaacaggag
ataaacccagatgcccttgagccccagtcagacccatctccagccagcagcgctcagcct
gaaccctcctgtggcgacccagagactgacaagaagatcaagaacgtaaagaagaaactg
aaagctatcgacgagctgaaagcgctgcaagcaactgggaaacccattcaaaagaaccag
cttgaaaagatggaaaaggaggctcaactcatgaaagagcttgaggatcttcaactagga
gtgtaa
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