Coregonus clupeaformis (lake whitefish): 121561797
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Entry
121561797 CDS
T08357
Name
(RefSeq) ATP-binding cassette sub-family F member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cclu03012
]
121561797
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121561797
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
RsgA_GTPase
AAA
MMR_HSR1
NACHT
AAA_15
AAA_28
DUF1672
AAA_16
ATP-synt_ab
DUF87
AAA_23
ORC-CDC6-like
Sigma54_activ_2
Dynamin_N
TXNDC16_3rd
Motif
Other DBs
NCBI-GeneID:
121561797
NCBI-ProteinID:
XP_041730188
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All DBs
Position
5:complement(19973548..20003878)
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AA seq
716 aa
AA seq
DB search
MSRCIMATYVDILKSEFPEIDTEVFEYITGVLDCGGVEFEDGEEVYDAIGGLLQGSSADC
KNEDDIRDICQQMFNTLKLSNGHAASKQVLLDAPVQLSQISAECVSATNDVQGIWMMKRG
QNTTVDARKLEKAEAKLKQKQGRRNERDSQKTTSPLVLEEASASQASSKKDSRVDLSGKN
RSYDIRIENFDVSFGERSLLQGAELSLSTGRRYGLIGRNGLGKTTLLKMLASRSLRVPAH
ITILHVEQEVAGDDTGALQSVLESDTVREGLLTEERLLNARIANGTAEGMETVRLSEIYA
KLEEIEADKAPARASIILCGLGFSPKMQTQTTKEFSGGWRMRLALARALFAKPDLLLLDE
PTNMLDVRAILWLENYLQTWQTTILVVSHDRNFLNAVVTDIIHLHSQRLESYRGDYENFV
KTKEDRLKNQQREYEAQFQYREHIQVFIDRFRYNANRAAQVQSKLKLLEKLPELKPLEKE
TEVTLKFPDNFEKLSPPVLQLDEVEFYYNTDQRLFTQLSVSADLESRICIVGENGAGKST
MLKLLMGELTPVNGIRHSHRNLKIGYFSQHHVDQLDLNVCSIELLLNKFPGRNEEEYRHQ
LGGYGITGELATRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALAKAL
NKFKGGVVLVSHDERLIRLVCRELWVCEHGNVRRVEGGFDEYRDILQEQFRKEGYL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtgtatcatggcgacatacgtggatattctgaagagcgagtttcccgaaatt
gacaccgaagtgttcgaatacatcacgggtgtgttggactgtggaggggtggagtttgag
gatggagaggaggtgtatgatgcgattggagggctgctgcaggggtcgtctgctgactgt
aaaaacgaggatgacatccgggacatctgtcagcagatgttcaacactcttaaactgagt
aacggacatgccgcttcaaagcaagtgctgctcgacgctccggtgcagttgtctcagata
tctgcagagtgtgtatctgccactaacgatgtccaagggatctggatgatgaagagaggc
cagaatacaactgtggacgcgaggaagctagagaaggccgaagccaagctgaagcaaaaa
caagggaggaggaatgaacgtgattcgcaaaaaactactagtccactggtactggaggag
gcatcagccagccaggccagtagcaagaaagacagtcgcgttgacttgtccgggaagaat
cgcagctacgacatccgcattgagaactttgatgtgtcgtttggcgagcggtccttgctg
cagggggcggagctgtctctgtcgacaggtcgccgctacggcctgattggccgcaacggc
ctggggaagaccacgctgctgaagatgctggcgagccgcagcctgcgcgtccccgcccac
atcacgatcctgcacgtggagcaggaggtcgctggcgacgacacaggggcgctgcagagc
gtgctggagagcgacacggtccgggaggggctcctgacggaggaacgcctgctcaatgcg
cgcatcgccaacggaactgctgaaggaatggagactgttcgactgtcagagatctacgct
aaactggaggagattgaagcagataaggcacctgcccgagcttcaatcatcctatgtggt
ttaggtttttctcctaaaatgcaaacgcagacaaccaaggagttttctggaggttggaga
atgagattagctctggctagagctctcttcgccaagcctgatcttttgttacttgatgag
cccaccaacatgttggatgtccgagccattctttggctggagaattacctgcagacctgg
cagaccaccatcctggtggtgtcccacgaccggaacttcctcaacgccgtggtgactgac
atcatccacctgcactcgcagcggctggagagttaccgtggcgactacgagaactttgtc
aagaccaaagaggaccgcctgaagaaccagcagagggagtacgaggcccagtttcagtac
agagagcacatccaggtgttcatcgaccggttcagatacaacgccaacagagcggcacag
gtgcagagcaaactgaagctcttagaaaaactgcctgaactcaaacctctggagaaggaa
accgaagtcaccttaaagttccctgataactttgagaagctgtctcccccagtgctccag
ttggatgaggtggagttctactataacaccgaccagcgcctcttcacacagctgtcggtg
tctgcagacttggagtctcgcatctgcatcgtgggtgagaacggggcgggtaaatccacc
atgctcaagctactgatgggagagttaacgcccgtcaacggcatcagacacagccatcgg
aacctgaagatcggttacttcagtcagcaccacgtggatcaactggacctcaacgtgtgt
tcaattgagctgctactcaacaaattcccaggtcgtaacgaggaggagtacaggcaccag
ctgggtggctatgggataacaggggagctggccactcggccggtggccagtctgtcagga
gggcagaagagccgggtggccttcgcccagatgaccatgccttgcccaaacttctatatc
cttgacgagccgaccaatcacctggacatggaaacaatcgaggctctagcgaaggcgctc
aacaaattcaaaggtggggtggtccttgtctctcacgacgagcgtctgatccggctggtg
tgcagagagctgtgggtctgtgagcacgggaacgtgcggcgagtggaggggggcttcgac
gagtaccgggatatcttgcaggaacagttccgcaaggagggctacctgtga
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