KEGG   Coregonus clupeaformis (lake whitefish): 121561811
Entry
121561811         CDS       T08357                                 
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03410  Base excision repair
cclu04140  Autophagy - animal
cclu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121561811
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121561811
  09143 Cell growth and death
   04217 Necroptosis
    121561811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121561811
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121561811
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121561811
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    121561811
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121561811
   MMR (mismatch excision repair)
    Other MMR factors
     121561811
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   121561811
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 HMG_box_5
Other DBs
NCBI-GeneID: 121561811
NCBI-ProteinID: XP_041730194
LinkDB
Position
5:19937754..19940502
AA seq 194 aa
MGKDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFSEFSKKCSERWKPMSPKEKGKFE
DMAKQDKVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFVFCADFRAKIKSEHPGLS
IGDTAKKLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRTNGRVDTASSAAADDDDE
EEDEEDDDDEDDDE
NT seq 585 nt   +upstreamnt  +downstreamnt
atggggaaagatcctaggaaaccgagaggcaagatgtcatcatatgcttacttcgtgcag
acctgcagggctgagcacaagaagaaacaccccgaagccagcgtgaacttctctgagttc
tccaagaaatgctcagagcgatggaagcccatgtctcctaaagagaaaggcaagtttgaa
gacatggcgaagcaagacaaggtccgctacgagagagaaatgaagaactacatcccaccc
aatggccagaaaaagaagaggttcaaggatcctaatgcccccaagagaccgccgtctgca
ttcttcgtcttctgtgctgacttccgggccaagataaagagtgagcacccaggtctgtcc
atcggagacactgctaagaagctgggagtgatgtggaacagctctgcagctgaggagaag
aagccatacgagaagaaggcagccacgctgaaggagaaatacgacaaggatatcgcctca
taccgcaccaatggtagagtggatacggcctcctccgcagctgctgatgatgacgacgaa
gaggaggatgaggaggatgacgacgatgaggatgatgacgagtag

DBGET integrated database retrieval system