Entry |
|
Name |
(RefSeq) high mobility group protein B1
|
KO |
K10802 | high mobility group protein B1 |
|
Organism |
cclu Coregonus clupeaformis (lake whitefish)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cclu00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121561811
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121561811
09143 Cell growth and death
04217 Necroptosis
121561811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:cclu03036]
121561811
03400 DNA repair and recombination proteins [BR:cclu03400]
121561811
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:cclu04147]
121561811
Chromosome and associated proteins [BR:cclu03036]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
121561811
DNA repair and recombination proteins [BR:cclu03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121561811
MMR (mismatch excision repair)
Other MMR factors
121561811
Exosome [BR:cclu04147]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121561811
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5:19937754..19940502
|
AA seq |
194 aa
MGKDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFSEFSKKCSERWKPMSPKEKGKFE
DMAKQDKVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFVFCADFRAKIKSEHPGLS
IGDTAKKLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRTNGRVDTASSAAADDDDE
EEDEEDDDDEDDDE |
NT seq |
585 nt +upstreamnt +downstreamnt
atggggaaagatcctaggaaaccgagaggcaagatgtcatcatatgcttacttcgtgcag
acctgcagggctgagcacaagaagaaacaccccgaagccagcgtgaacttctctgagttc
tccaagaaatgctcagagcgatggaagcccatgtctcctaaagagaaaggcaagtttgaa
gacatggcgaagcaagacaaggtccgctacgagagagaaatgaagaactacatcccaccc
aatggccagaaaaagaagaggttcaaggatcctaatgcccccaagagaccgccgtctgca
ttcttcgtcttctgtgctgacttccgggccaagataaagagtgagcacccaggtctgtcc
atcggagacactgctaagaagctgggagtgatgtggaacagctctgcagctgaggagaag
aagccatacgagaagaaggcagccacgctgaaggagaaatacgacaaggatatcgcctca
taccgcaccaatggtagagtggatacggcctcctccgcagctgctgatgatgacgacgaa
gaggaggatgaggaggatgacgacgatgaggatgatgacgagtag |