Coregonus clupeaformis (lake whitefish): 121561924
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Entry
121561924 CDS
T08357
Symbol
nlgn4xa
Name
(RefSeq) neuroligin 4 X-linked a isoform X1
KO
K07378
neuroligin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121561924 (nlgn4xa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121561924 (nlgn4xa)
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121561924 (nlgn4xa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COesterase
BD-FAE
Abhydrolase_3
MPS-4
Motif
Other DBs
NCBI-GeneID:
121561924
NCBI-ProteinID:
XP_041730279
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Position
6:complement(52743875..52806573)
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AA seq
863 aa
AA seq
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MLRGTRPGGTSTSPWSSRGATIAHGMGMVYLSKVYLLLWMGFLLVSVCLPVVAQTPVHPL
VTTNYGKLRGLKTTLPNEILGPVEQYLGIPYALAPTGERRFQPPEPPMSWPGIRNATQFA
PVCPQYLEEKLLNDMLPVWFTANLDTVVTYMQDQNEDCLYLNVYVPTEDGANSNSQGGDF
TNNDGDEDEDIHDENGLKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGVL
GFLSTGDQAAKGNYGLLDQIQALRWIKENIQAFKGDPKRVTIFGSGAGASCVSLLTLSHY
SEDLFQKAIIQSGTALSSWAVNYQPAKYTRMLAEKVGCNMLDTIDLVECLQSKNYKELIE
QNILPAKYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGFKFVEGSVDSED
GISANDFDFAVSDFVDHLYGYPEGKDTLRETIKFMYTDWADKENPETRRKTLVALFTDHQ
WVAPAVATADLHAQYGSPTYFYAFYHHCQSDMKPSWADSAHGDEVPYVFGIPMIGPTDLF
NCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWSKYNPKDQL
YLHIGLKPRVRDHYRATKVAFWLELVPHLHNINELFQYVSTTTKIPPQDTTPFPYTKRFP
GNRPSTTRHPGVPSANTKQTTDQRKGEDLTDESAVVIETKRDYSTELSVTIAVGASLLFL
NILAFAALYYKKDKRRHESNRRGPSPQLNSAGPANAVANANDIAHLQNEELMSLQMKQQQ
QMDHEHHHECESLQAHDTLRLTCPPDYTLTLRRSPDDIPLMTPSTITMIPNSLAAMQPLH
NFNTFGGSQNSTNLPHGHSTTRV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggggaaccaggccagggggaaccagtacctctccatggagctctcgaggagcc
actatagctcatggaatggggatggtctacctatccaaggtctaccttctcttatggatg
ggcttcctgttagtgtctgtgtgtctgccggtcgtggctcagaccccggtccaccctctt
gtcaccacgaattacgggaaactgagggggttaaagacgacactgcccaatgagatccta
gggcccgtggagcagtacttggggatcccgtacgctttggcccctacaggggagagacgc
ttccagccccccgagccgcccatgtcctggcctgggatcaggaatgctacccagttcgcc
cctgtgtgtccacagtacctggaggaaaagttactcaacgatatgctgcctgtgtggttc
acagccaacttggatacagtggtaacctatatgcaggatcaaaacgaggactgcctgtac
ctaaacgtttacgtgccaactgaggatggagccaactcaaacagtcaaggcggtgatttc
accaataatgatggtgatgaagacgaagacatccatgatgagaacgggctgaagccagtc
atggtgtacatccatggtggatcctacatggagggaacggggaacatgattgatgggagt
attctggcgagctacggaaacgtcatcgtaatcaccataaactacagactcggagtgtta
ggcttcctaagcacaggggaccaggcagccaaggggaactatggactgctggaccagatc
caagccctgaggtggatcaaagagaacattcaggccttcaaaggagatccaaagagagtg
acaatcttcggctctggtgcaggggcatcgtgtgttagcttgctcactctctctcactac
tcagaagatctcttccagaaagccatcatccagagtggtacagctctctccagctgggcg
gtcaactaccagcctgccaagtacacacggatgctggctgagaaggtgggctgcaacatg
ctggacaccatcgacctggtggagtgcctccagagtaagaactacaaggagctgatcgaa
cagaacatcttacccgcaaagtaccacatcgccttcggccccgtcatcgacggcgacgtc
atcccggatgaccctcagatcctcatggagcagggcgagttcctcaactacgacatcatg
ctgggggtcaaccaaggcgaagggttcaagtttgtggagggcagcgtggacagcgaggat
ggcatctcggccaacgacttcgactttgccgtgtcggactttgtggatcacctttacggc
tacccggagggcaaggacacgctaagggagaccattaagttcatgtacactgactgggcc
gacaaggagaaccccgagacacggaggaagacgttagtcgcactcttcaccgaccaccag
tgggtggctccggccgtagccacagcggacctccatgcccagtatggttcaccaacatat
ttttacgccttctaccatcactgccagagcgacatgaagcctagctgggctgactcggca
catggggacgaggtgccctatgtgttcgggatccccatgatcggacccacggacctgttc
aactgcaacttctccaagaacgacgtcatgctcagcgcagtggttatgacctactggact
aactttgccaagacaggagatccaaaccagcccgttcctcaggacaccaagttcatccat
acaaaacccaaccgctttgaagaggttgcctggtcgaagtacaaccccaaggaccagctc
tacctgcacatcggcctgaaacccagggtcagggaccactatcgggccaccaaggtagcc
ttctggctggaactagttccacacctccacaacataaacgagttgttccagtacgtatcc
acaacgaccaagataccgccgcaggacaccaccccgtttccttacaccaagcgtttcccg
ggcaatcggccatctaccacccgccaccctggggttccctccgccaacaccaagcagacc
accgaccagcggaaaggtgaggacctcacagacgaatcagcagtggttatcgagactaaa
cgggactattccacagagctgagcgtcaccatcgccgtgggagcctcgctgctcttcctc
aacatcctggcgttcgcggcactctactacaagaaggacaagcggcggcacgagtcaaac
cggcgcgggccgagcccacagcttaactccgccgggccagccaacgcggtggccaacgcc
aatgacatcgcccacttgcagaacgaggagctgatgtccctgcagatgaagcagcagcag
cagatggatcacgagcaccaccacgagtgtgagtcgctccaggcccacgacacgctgcgc
ctcacttgcccgcccgactacaccctcacactgcgtaggtcgccagacgacatccccctc
atgacgcccagcaccataaccatgatcccgaactcgctggccgccatgcagccacttcat
aacttcaacacgtttggcggcagtcagaacagtaccaacctgccccatggacactccacc
accagggtataa
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