Coregonus clupeaformis (lake whitefish): 121561953
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Entry
121561953 CDS
T08357
Symbol
acsl1a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1a isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121561953 (acsl1a)
00071 Fatty acid degradation
121561953 (acsl1a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121561953 (acsl1a)
09143 Cell growth and death
04216 Ferroptosis
121561953 (acsl1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121561953 (acsl1a)
03320 PPAR signaling pathway
121561953 (acsl1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121561953 (acsl1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121561953 (acsl1a)
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121561953 (acsl1a)
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121561953 (acsl1a)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121561953 (acsl1a)
Exosomal proteins of breast cancer cells
121561953 (acsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GSG-1
Motif
Other DBs
NCBI-GeneID:
121561953
NCBI-ProteinID:
XP_045062314
LinkDB
All DBs
Position
22:complement(3581258..3640445)
Genome browser
AA seq
699 aa
AA seq
DB search
MQMQAQELLRQLRIPELEDVRQYMHSLPANMLMGVGALAALTTYWYATRPKALKPPCDLN
MQSVAMAGDGYVRRSILNNSDEHMTYYYSDARTMYEVFLRGLRVSNDGPCLGSRKPNQPY
EWLSYREVADKAECIGSALLHRGHSPTGDKHIGIFAQNRSEWTISELACYTYSLVCVPLY
DTLGLEAIEYIVDQAAISTVICDLADKARLILDCVSGKEHTLKTIVLMEAFDEELVTRGQ
QSGIEILSLKDVEAVGKTHHQQPLPPSPEDLALICFTSGTTGNPKGGMLTHGNVIANCAA
FIKITESILKLSPKDVLISFLPLAHMFERVFEGVILVHGARIGYFQGDIRLLMDDLKTLQ
PTVFPVVPRLLNRMFDKIFGQANTPLKRWLLVFASRRKHAEMMNGVVRKDSLWDKLVFQK
VQNSLGGRVRLMITGAAPVSPTILTFLRAALGCQFYEGYGQTECTAGCTMSMPGDWTAGH
VGAPLPCNYVKLVDVTEMNYFAANGEGEVCVKGPNVFKGYLNDPEKTKEALDQDGWLHTG
DIGKWLPNGILKIVDRKKHIFKLAQGEYIAPEKVENIYIRSNPVAQIFVHGDSLQACLVG
IVVPDPDFLPGWAKKKGIEGSYLEMCASKELKNAILEDILRLGKEGGLKSFEQVRDILLH
TEMFSVQNGLLTPTLKAKRTELRSHFREQIDLLYAKIKM
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgcaggcccaggagctcctgagacagctgcggatcccagagctggaggatgtg
cgccagtacatgcacagcctgcccgccaacatgctgatgggcgtgggcgccctcgccgcc
ctcaccacctactggtacgccacgcggcccaaggccctaaagccgccctgcgacctcaac
atgcagtcagtggccatggcgggtgacggttacgtcaggcggtccattctgaacaacagc
gacgaacacatgacttactactacagtgacgcgcggaccatgtacgaggtcttcctccga
ggcttgcgggtgtccaatgatgggccctgtctaggatcgagaaaacccaaccagccttac
gagtggctgtcataccgagaggtggcagacaaagcggagtgcattggctcggctcttctc
cacagagggcactccccgactggagacaagcatatcggcatctttgcccagaacaggtca
gagtggaccatttcagagctggcctgttacacgtactccctggtgtgtgtcccactgtat
gacacgctaggcctcgaggccattgaatacatcgtcgaccaagccgccatctctacggtg
atctgcgacttggcggacaaggcgcggctcatcctggactgtgtgagcggcaaggagcac
acattgaagaccatcgtgctcatggaggccttcgacgaggagctggtgacccgtgggcag
cagagcggcatcgagatcctcagcctgaaggatgtggaggctgttggcaagacccaccac
cagcagccattgcccccatcaccggaggacctggcactcatctgcttcaccagtggaacc
acaggaaacccaaagggtggaatgcttacacatggcaatgttatcgccaattgtgctgct
ttcatcaagataacagagagcatactcaagctcagccctaaggatgtgctcatctccttc
ctaccactggcccacatgtttgagagggtttttgagggagtgatcctggtgcacggtgcc
cggattggctactttcagggggacatccggctcctgatggacgacctgaagaccctgcag
cccacagtcttccctgtggtcccccgcctgctcaaccgcatgtttgacaagatcttcgga
caggccaacacgccactgaagaggtggctgctggttttcgcctccaggaggaagcatgca
gagatgatgaatggtgtggtcaggaaggacagcttgtgggacaagcttgtcttccaaaaa
gtccagaacagtcttgggggtcgtgtgaggctgatgatcacaggagcggccccagtgtct
ccaaccatcctgaccttccttcgggccgctcttggctgccagttttacgaaggctatggt
cagactgagtgcacagccgggtgtaccatgtccatgcctggggactggacagcaggtcat
gtgggagctccactgccctgcaactatgtaaagctggtggacgtgactgagatgaactac
tttgctgccaatggggagggagaggtgtgtgtgaaaggaccaaacgtattcaagggctac
ctaaatgacccggagaagaccaaggaggccttggatcaggatggctggctccacacggga
gacattgggaagtggctgcctaatggcattctgaaaatcgtggacaggaagaagcacatc
ttcaagctggctcaaggagagtacattgccccggagaaggtcgagaacatctacatccgg
agcaacccagtggcccagatctttgtccatggcgatagcttgcaggcatgcctggtgggc
attgtggtgcctgatccggacttcttaccaggatgggcaaagaagaagggcattgagggt
tcttatttggagatgtgcgcaagcaaggagttgaaaaatgccattctggaggacattctg
aggctggggaaagaaggggggctgaagtcttttgagcaggtgagagatatcttgctgcac
acggagatgttctccgtccagaacggcctcctgacgcccacgctcaaggccaagaggacc
gaactccgcagtcacttccgagagcagattgacctgctctatgccaagatcaagatgtga
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