Coregonus clupeaformis (lake whitefish): 121561961
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Entry
121561961 CDS
T08357
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121561961
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_14
LRR_LRWD1
LRR_EndoS
LRRNT
CAS_CSE1
Sigma_reg_N
HemY_N
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
121561961
NCBI-ProteinID:
XP_041730314
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MDFLLIGLYLKWPLRKPPGLILLLWCTLGIMLKMVPSVEGVCPRLCRCDSKLLYCEGLNL
TDVPRNLSSALGLSMRENNLTELREGHFTGLSQLTWLYLDHNNIDVVEEGTFDRLRRVKE
LDLSTNHIESLPNGTFRPLPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNALKFVP
VRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRT
LYMRNNRATVVVSTLDWTWPFLEKIDLSANEIAYIEPHVFESVPNLKALMLDANRLTAVE
QRILDSWSSLGSITLAGNEWECSRNVCALAQWLSAFRGQRDSQLLCSSPDVAQGEDILDA
VYAFQLCEDGGDQDTTTMGWYPGYTAKDQFQGGPTANPYDPPAAEGGAVVTNSFTVTVGN
LDDIESTMQIHKVVTGTMALIFSFLIVVLMLYVTWKCFPAGVRQVRQCFSSHRRKQKQKQ
SMQQMATMSTPEYYVDYKPNHIEGALVIINEYGSCTCQQQPSRECEV
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttctaattggcttgtacctaaagtggcccctgaggaagccccctgggttg
atactgttgctgtggtgcacgctgggcatcatgctcaaaatggtcccctcggtggagggt
gtctgcccacggctgtgccgctgcgacagcaagctgctctactgcgaagggctcaatctc
accgacgttccgcgaaacctgagcagcgccctgggcctgtccatgcgcgagaacaacctg
acagagctgcgcgagggccacttcactggcctgtcgcagctcacctggctctacttggat
cataacaacatcgacgtggtggaggagggcaccttcgacaggctgcgccgggtcaaggag
ctcgacctgagcaccaaccatatcgagagcctgcccaacggcaccttcaggcccctcccc
aacctgcgcatcctggacctatcatacaacaggctgcaagcgctggaacccgacctgttc
cacggcctgaggaagctaaccaatttgcatttgcgctacaacgccctcaagtttgtccca
gtgaggatcttccaggactgccggagcatgcagttcctggacctgggctacaaccagctt
cagagcctggcgcgaaactccttcgccgggctcttcaagctcaccgagctgcacctggag
cacaacgagctggtcaaagtcaacctggcccacttcccccgcctcatctcgctgcgcacg
ctctacatgcgcaacaaccgggccaccgttgtggtcagcaccctggactggacctggccc
ttcctggagaagatcgacctatcggccaatgagatcgcatacatcgagccgcacgtcttc
gagagcgtgcccaacctcaaggccctcatgctggacgccaaccggctgacggccgtggag
cagcgcatcctggactcgtggtcgtccctgggcagcattaccttggcaggcaatgagtgg
gaatgcagccgcaacgtgtgcgccctggcccagtggctgagcgccttccggggccagcgg
gacagccagctgctgtgctccagcccggatgtggcgcagggcgaggacatactggatgcc
gtctacgccttccagctgtgcgaggatggcggcgaccaggacaccacgaccatgggctgg
taccccggctacactgccaaggaccagttccagggcggccccacggccaacccatatgat
ccaccggccgctgagggcggcgcagtggtcaccaattccttcacggtgactgtgggtaac
ctcgacgacatagagagcaccatgcagatccacaaggtggtgacgggcaccatggcgctc
atcttttccttcctcatcgtggtgctgatgctctacgtgacctggaagtgtttcccggcg
ggtgtgcggcaggtgcgccagtgcttcagcagccatcggcgcaagcaaaagcagaagcag
agcatgcagcagatggccaccatgtccacgccggagtactacgtcgactacaagcccaac
cacatcgagggggccctggtcatcatcaacgagtacggttcctgcacctgccagcagcag
ccctcccgggagtgcgaggtctga
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