Coregonus clupeaformis (lake whitefish): 121561992
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Entry
121561992 CDS
T08357
Name
(RefSeq) claudin-15-like isoform X1
KO
K06087
claudin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04382
Cornified envelope formation
cclu04514
Cell adhesion molecule (CAM) interaction
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121561992
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121561992
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121561992
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121561992
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121561992
04147 Exosome [BR:
cclu04147
]
121561992
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121561992
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121561992
Exosomal proteins of colorectal cancer cells
121561992
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF6223
Amastin
Motif
Other DBs
NCBI-GeneID:
121561992
NCBI-ProteinID:
XP_041730337
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Position
5:18879882..18886948
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AA seq
224 aa
AA seq
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MSTAVELTGFLLCVASWLLTGSSLANDYWKLSSVSGSVIVSTRQFQNLFHSCAENSAGIR
NCKDFESMLALPGYIQACRALMIIALLLGLASIIVSVLGLKCTKIGSTSEQAKGKIALTG
GSLFILSGLSTLTAVSWYAARVVQEFHDPFFAGVRFELGAGLYMGWGAACLAILGGVMLC
CSCKKGPSGPPTGGYSNNYSKTGRGQQIYRAAPVSESGSSKAYV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggcggtggaactaactgggtttttgttgtgcgtggcgagctggctactcaca
ggctcctcactagccaatgactactggaagttgtcctcggtgtctggcagtgtcatcgta
tccacacgccagttccagaatttatttcactcgtgtgccgagaacagcgccggcatcagg
aactgcaaagactttgagtctatgctcgctttgcctggctacatacaggcatgtcgagcc
ctgatgatcatcgctctgctcctgggtctagcgtccatcattgtgtcagtgctggggctg
aaatgcacaaagatcggcagtacttctgaacaggcgaagggcaaaatcgctctgaccggc
ggtagcttgttcatcttatcaggtctttccaccttgactgctgtgtcatggtatgctgca
cgggtggtacaggagttccatgatccattctttgcaggagtaaggtttgagctgggtgca
ggtctatacatgggctggggtgctgcctgtctggccattctgggtggggtcatgctctgc
tgttcctgtaagaagggtccatcaggaccaccaacagggggatattcaaacaactactcc
aaaacaggccgtggacaacagatctacagggcagcacctgtgtcagagtcggggagttca
aaagcttatgtttaa
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