Coregonus clupeaformis (lake whitefish): 121562390
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Entry
121562390 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: FERM and PDZ domain-containing protein 1-like
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121562390
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
FERM domain-containing proteins
121562390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
PDZ_2
FERM_f0
RA_3
Motif
Other DBs
NCBI-GeneID:
121562390
NCBI-ProteinID:
XP_045073236
LinkDB
All DBs
Position
Unknown
AA seq
1438 aa
AA seq
DB search
LRDPLLNTHGLTLTPQTPILVQDVTPAGPADGRLVPGDQVVKINNVAVDDLTPEQAADLI
RECQCSVMITVLRNSVGPKSSFITPEKRAKLRSNPVKVRFAEEVEVNGHSQGNSLLFLPN
VLKVYLENGQTKAFKFEPNTTVKDIVMTLKEKLSLSRIEHFSLVLEQKYSISKLLLLHEE
ERIQQVVHQKEVHDYRCLFRVCFVPREPEHLLQDDPTAFHYLYLQGINDVLQERFAVEMR
CNTALRLAALQIQERLASCGQSPKTNLKIITKSWGIENFVSSTLLRNMREKDLRKAIGYH
MKKSQSQEPKQKVLSANQAKIDYLAELCDLKSFGGKSFSATMMLQDRESMVTLLVGSRYG
ISQVVNHKLSIMTSLTEFSSITRIELLPESDRVSLVKIYLQDIKPITLLLESVAAKDMSC
LVAGYCRALVDPSLIIFPWTQDAKQHRVSAEEGYVSRCGSDSDDSSDMDTLISLVSHNNK
RTASDPVGLRRIMEERKEERKERKEREERKKKEKEGNERKEKREGEQEKNMKYGTMSPQR
KNRENERIEEKVGGVGDQRKKDTEAGGEEKSEKQLGAENRGMQEDDRERENESDARCYYN
ICPNVTPDSACSLTHPHPKAEEEEGGGGEEEQGAVLTLEPVPILQPPPGFGDSSSDEEFF
DARDRFASPEDPTSGTVSRVSYPGPDQNQERNMDWNPDHVPDQYPDRVQNRTESSDESQL
LSLDPEPSEQSQNPCPTVSSLSHTEGEAFQLESKPILTKPTREGSHQGPGDPRAPDNPKA
ELHRSSRSRRKSMETEPDVMESKSVTALVTAASSSITAVRCRVEPDGKESTDRRGDGEEG
EMEEEEGGGEAGAGPIPPPALLTGHHRPKPLGLHITGKIQSLPLYLSRSQETLTLSGVGS
TTRSPSQEPTSDKTERWRQWRIRKIPGVALAESDDSEVTLTESEVGEVVVETAGAEITRL
TVSEVKEVVEKVVMVYGSSPPPPLAPIYVEPKPEPKMVAKLPTCPIATVETTPPMATAPI
CLEPKPVSELLSPSPTIHKMAAPLPSCPSSPVPIRVEPKPEHESLSIHSKMAALSSSNPP
ALVVTTQSLNSPSSNPPPIRVEPKTDPCPEPLSLDPKMSSPLSSCPSAIVVTTQSLNGPG
LSFPGYNMRGRPFGGNSFCKPPGEEAGLLNTLTTGCGVFTSTCETQPNQAHMESYPLEKP
DLGCSSVLVSGCEVVLEGVQTPLEACRCPPPLVYTNCFSGGDSFDDELTVYEFSCRTIQS
PGRYRPTTPPPLPTAPRRVPDYPERRGTSLSPSCREGGWGRGEAPRETCATHFSENKRLL
HGRPRRLMAGCQKVVRVGQTPDEMLLSLSDSFKTLVGMAGMCLWFSGCDRCDRRNAEALA
GLAGVARTYREFVAGGGEARAGGGRCHDLSTKLLAKQCTALTASVFCLTQLFRTLTAL
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
ctacgagaccccctcctcaacactcatgggctcaccctgacacctcagacacccatactg
gtgcaggacgtcaccccagcggggccggctgatggaaggctagtccctggcgaccaggtc
gtaaagatcaacaatgttgccgtcgacgacctgaccccagagcaagcggctgacctcatc
agggagtgtcagtgctctgtgatgataacagtcctcagaaactcagtgggacccaagtct
tccttcatcaccccagagaagcgagctaaactccggtccaacccagtcaaagttcgcttt
gctgaggaggtcgaggtcaacggtcactctcagggcaactcgctgctcttcctccccaac
gttctaaaggtgtatctggagaacggacagaccaaggccttcaagtttgaacccaacacc
actgtcaaggacatagtgatgaccctgaaggagaaactgtctctgtctcgtattgaacac
ttttctctggttctggaacagaagtacagcatcagtaaactactgttactacatgaagag
gagaggatacaacaggtggtccatcagaaggaagtccatgactacaggtgtctgttcaga
gtgtgttttgtacccagagaacctgagcacctgttacaagacgaccccactgccttccac
tacctctacctgcagggtattaatgacgtgctacaggagcgttttgcggtggagatgcgt
tgcaacacggccctgcgtctagcagccctgcagatacaggagagactagccagctgtgga
cagtcacctaagaccaacctcaagatcatcacgaagagttggggcattgagaactttgtc
tcatcaaccctcctgaggaacatgagggagaaggatctgaggaaggccattggctaccac
atgaagaagagccaatcacaggagcccaagcagaaggtgctgtcggccaatcaggcgaag
attgactacctggctgagctgtgtgacctcaagtcctttggcgggaagtcctttagtgcc
accatgatgctccaggacagggagtcgatggtgaccctgttggtggggtcgcggtacggt
atcagtcaggtggtgaaccacaaactgagcatcatgacctcactcacagagttcagcagt
atcacacgcatagagctgctaccagagtctgaccgtgttagtctggtcaagatctatcta
caggacatcaagcccatcaccctgttgttggagtcagtagcagccaaggacatgtcctgt
ctggtggcagggtactgtcgtgccctagtggaccccagcctcatcatcttcccctggaca
caggacgccaagcagcaccgcgtgtctgccgaggagggctatgtgtcgcggtgtggcagt
gactcggatgattcctcagacatggacaccctcatctcccttgtatcccataacaacaag
cggaccgcatcagaccctgtcggtctacgacgcattatggaggagaggaaagaggagaga
aaagagaggaaggagagagaggagaggaaaaagaaggagaaagaggggaacgagagaaag
gagaagagagaaggagaacaagagaaaaatatgaaatacggaactatgtctccacagaga
aaaaacagagagaacgagagaatagaggagaaggtgggaggagtaggggaccagagaaag
aaagacactgaagcaggaggagaggagaagtctgagaaacaactaggagcagagaacaga
ggaatgcaggaggacgacagagaaagagagaatgaaagcgatgcaaggtgttactacaat
atctgccctaacgttacccccgacagcgcatgcagcctcacccaccctcaccctaaggct
gaggaagaggagggtggtggtggtgaggaagagcagggggcggtcctgaccctggagccc
gtgcccatcctccagccgccgccagggttcggagacagcagttctgacgaggagttcttt
gatgcgagggatcggttcgcctcgcctgaagacccaacatcagggactgtgtccagagtc
tcctaccctggaccggaccaaaaccaggagcggaacatggactggaacccagatcacgtt
cctgatcagtatccggaccgggtacagaaccggacagagagctcagacgaaagccagctg
ctgagtttggacccagaaccctctgagcagagccagaacccatgtcctactgtctcctct
ctgagccacactgagggggaggcattccagctcgagtccaagcctatcctcaccaagccc
acccgagaggggtcccaccagggacctggagatccacgggcgcctgataacccgaaggct
gaactccataggagctccaggagcaggcggaagtccatggagacagagcccgacgtgatg
gagtccaaatcggtcacggccctggtgacggcagcctcctcctccatcacagctgtacgc
tgtagagtagaaccagacggcaaggagagcactgatcggagaggagacggggaggaggga
gagatggaggaagaggaagggggtggagaagcaggggcaggaccgattcctcctccggcc
ttgctcaccgggcatcatcggccaaagcctctcggcctccacattacggggaagatccag
agcctgcccctctatttatctcgctcccaggaaaccctcaccctctctggggtgggcagc
accaccaggagcccctctcaggagcccaccagcgacaagactgagcggtggcgacagtgg
aggattcgaaagattccgggggtggcgttggcggagtcggatgattccgaggtcacgctg
acggaatcggaggttggcgaggttgtcgtggagacggccggggcggaaatcacaaggttg
acggtgtcggaggtcaaggaggtggtcgagaaggttgtgatggtctacggatcctcccct
cctcctcctttagcacccatctatgtagagcccaaaccagaacccaaaatggttgccaag
ttgcctacctgtcccattgctacagtggaaaccacccctcctatggctacagcacctatc
tgtctggagcccaaaccagtctctgaactactctccccaagccccactatccacaaaatg
gccgccccattaccttcctgtccttcctctcctgtgcccatacgcgtagagcccaaacca
gaacatgaatcactatccatacactccaaaatggccgccttatcgtcctctaatccccct
gctttagtggtaaccacacagagtctgaattccccttcttctaatcctcccccaatcaga
gtagaacccaagacagacccttgccctgaaccgctgtccctagaccccaaaatgtcctct
ccgttgtcttcctgcccctctgctatagtggtgaccacacagagtctgaatggaccgggg
ctcagcttccctggttataacatgagaggacggccattcgggggaaacagcttctgtaaa
cccccaggggaggaggcaggcctgctgaacaccctgactacaggctgtggggtcttcacc
tccacctgtgagacccagcccaaccaggcccacatggaatcctacccgctggagaagcct
gatttagggtgtagttcggtgctggtgtcggggtgcgaggtggtcctggagggggtgcag
acgcccctggaggcatgcaggtgtccgccaccgctagtttataccaactgtttcagtggg
ggtgacagcttcgacgatgagttgacagtttacgagttctcctgccggacaatccagtct
ccaggacgatatcggccgactacgccaccgccgcttcccaccgccccccgcagggttcca
gactatccggagcgacgtgggacgagcttatcaccctcctgcagggagggaggatggggg
agaggggaggcaccaagggagacctgcgccacccacttctcagagaacaagcgtcttctc
cacgggaggccccggaggctgatggccggctgtcaaaaggtggtccgggtggggcagacc
ccggacgagatgctcttgtccctgtccgacagcttcaagaccctggtgggcatggccggc
atgtgcctgtggttctccgggtgcgaccggtgcgaccggaggaacgctgaggcgctggct
gggctggcgggcgtggccaggacgtaccgggagtttgtagctggcggcggagaggcgcga
gcgggaggcggacgctgtcatgacctcagcaccaagctccttgccaagcagtgtaccgcc
ctcactgcttccgtcttctgcctcacacagctgttccgcacactcaccgccctctga
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