Coregonus clupeaformis (lake whitefish): 121562502
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Entry
121562502 CDS
T08357
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121562502
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121562502
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121562502
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121562502
Intermediate filaments
Intermediate filament-binding proteins
121562502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
121562502
NCBI-ProteinID:
XP_041730681
LinkDB
All DBs
Position
5
Genome browser
AA seq
2739 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLAGSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQGIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAIE
GQKMIDRYEALASELLEWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVQTLNTAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LAAQTCGKDLSSVLRLLQKHKTLAGELLARRSLLQQTMKKGKQILMEKSFGTGSIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVREAVDKHRLHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEPFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVQ
TQTAAASDELPNALEEAERLINHHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPTT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSNRIKERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELAQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADLLVQSYTSLDHRLHQLEGQLCYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASIPQQGQVMDTVSERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQQLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPEAD
CVRAGLEQLSGLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSGQISKRQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNREVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSIGQERVTAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFADCREVLAQIDDKQRRLPEVRARQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPSIPHSDITGSGLSGPFRDVSSVEVLMNYHQSLKSEVEAR
SKSVLQCIEMGKTLLAARNPAAEEIKEKLDTVVAKQYELSEKWDKHWEVLQHMLEVHQFA
QEAVVAEAWLTAQEPFINSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVE
KLKAEQSKLPPTPLLGRKVFLDPQETSPARSQGSPLMRRILYEQAEPRAERPPQDPSPSS
VAHRLGSTVANYTPILNGSSSYRSSLEARAIPVMGGVVGGVVGVAAGLGTATMEARGVAT
NLGTTAAMEVRGVAAGFGTSTSEARGLAAGLVTPAVEAKGIAASLVTGAAAAVEVKASQY
LRQPKIKHMDDMVTPMLVACRLEKAREKEVREREQRERERDIGLMEPAPVMPVMAEVVLQ
EMGMGRERLNSEPSSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQHSSEALMIQ
ARRDELPQEVWRERAERKERKLERQTSSEQEGHGHEGRRKDRHRTERQESSEHDTAKEQS
DRRSTEKRSGGQTLFDIVEQLKEREAATARGEVPKVPNGVPEKSSGRPDRPRARDRPKPR
RRPRPKDPSAGEATTTRRSRSAPEPGMAQSVSPSVPQPPSHTAHHEGFLFRKLDIETMRK
SSNSRSWVNLYCVLNKGEIGFYKDAKNTTTPYNNEPMLNLGHCHCDVTLGYKKKKNVFTL
KTKDGSEFLFHAKDESQDDLKAWTTNINKSIAEHEEIAKWGQPQPTTSSTDEGTRRDASK
ADNKSDRGERPQRAERSERSDKGETKLDTKRSERSSKKK
NT seq
8220 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccagcgccagctcaacaacaac
aacacccgtctggccggcagctcgggacactgggaaaccgaggtgaccagctccaaactg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggccagagtgtcctgtcggatcgctgacctctac
aacgacctccgagacggctacatgctcaccaggctgctggaggtgctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcggatccattgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagagtccacctggagaacgtcggctctcatgacatcgtc
gacggcaaccaccgcctcacccttggcctcatctggaccatcatccttcgcttccagatc
caggggattaagattgagtgtgacgacaacagggagacgcggtcggcaaaggatgccctg
ctactctggtgccagatgaaaaccgctgggtactctgaggtcaacatccagaacttcacc
acatgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtccaatgccacacacaacctccagcaagccttcaac
attgctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacggag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtcttggacaatgccattgag
ggtcagaagatgatcgatcgatatgaggctctggcctcggagctcctggagtggatcgag
aagaccatagccatcatcagcaaccagaagtttgccaactccttaacgggtgttcagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaggtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaataaggcgtgggagaggctg
gagaaggcggagcatgagagaggcgtggccctacggcaggagctgattcgccaggagaag
ctggagctgctggcacagcggtttgaccacaagaccaccatgagacaggcatggctcaat
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagcggtggaggcc
gccatgaagaagcacgaggccattgaggcggacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactacgacatccgacgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggctggagaagaacctggccctgcagaagaccttccaggacatggtctac
atgatcgactggatggaggacatgcaggtccagctcctttctaaagacttcggcaagcat
ctgctggaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcacagtg
caggcagagagggtgcagacccttaacacagccgctctcaaattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccacgtcagcacctgcctg
gaggagctcaagcagctggcagccaagcggcgctcagagctggaggagtcacagcacctc
tgggccttcttccaggaggtggaggagtccgaggcctggatccgcgagaagagctccatc
ctggccgcccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccgccgctccctcctccagcagaccatgaagaag
ggtaagcagatcctgatggagaagagcttcggcacggggagcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcggcgcagagactgggccacctg
caggaggcactcaacttcttccagttcagcacggagacggacgacctgctggcctggctg
caggacgcctaccgcctagtgtccagcgaggactttggccacgacgagtactccacccag
tcgctgctcaagaagcaccggggtgtgcgcgaggccgtggacaagcaccggctgcatgta
gtaactctacgcaaacacatggtggcgctgccactgcactaccgggagctggacgaggtg
cagtcgaggatgggcgaggcagagcagctgtacgccgaggtggccgaggtggccgttctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaataagatggaggttccagagagg
ctggaggacgtggaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctctacagaggtcagaggctgtcaggaccacctcaacagcaggtggaaccgcatc
gtggagatggtggagcagaagaaggaccacctggactctgtactccgtctccagaactac
ctgctggagtgtgctgagatcaagtcccagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctctacc
atggagggggccctggctgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggccatctcacacccggccaaagccatggaggtcctggagcccttcgagggcatc
agtgtggagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcag
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggctgagaggctg
atcaaccaccacgcggcactgaaggaggagatcgggaggtatgaggaggactacgagcgg
ctgcaggcagtcaacgagctgctggaggccgaggaggctccgctaccctatgctgcgcta
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggctcacgttgagctccccaccacg
gtggagacggtggaggctgccatcaagaagcacaaggactttaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcataagccagagcaac
atctactctaaccgcatcaaggaacgtgtggacaccctcgctaacagaggcaaccagaac
cgggagctggcccaacagtggctggaaaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctggcccagaacaaggagtggctggagaagattgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggacctggagagtaccacccaggccaaggcccgccagctgtttgaagccaac
cgggccgacctgctggtgcagagctacaccagcctggaccatcggctgcaccagctggag
ggacaactgtgctacgtggaccagggtcaggacctgaccagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctccatcccccagcagggccaggtcatggacacggtcagtgagcgccag
gctgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggtgcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccacgtctcaggagcacggctccagtctacaggctgtg
cagcagctcatgaagaagaaccagactctgcagagggagctgcagggccatcgggcgagg
gtggaggacgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcagcgggctgtggggcctgctgtgggccgagaca
gagagaagacagctggttctggatgccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggaactgcacatgatgaacgaggaaaagggc
aaggatgagcccagcacactgcagctactgaagaagcacctggtactggagcagacgata
gaggactatgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgggcagatcagtaagcgtcagtctcagatggatcggctgtacgtg
tctctgaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccgcgaggtggacgagctggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgttacgatcctgcaggagaagttcaca
gagtttgcatcggagacgggcagtattggtcaggagcgtgtgacggcggttaaccagatg
gtggatgagctgatcgactacggccacgccgacgccgccaccatcgccgagtggaaggac
ggcgttaacgaggcctgggccgacctcctggagctcatggagacccgggcacagatgctg
gctgcctcgcaccagctccacaagttcttcgccgactgccgcgaggtcttggcccaaatc
gatgataagcagcggaggctgcctgaggtgcgggcgcgccagggtggcactgccaacacc
agcaccctgcagaggctcatgcacagcttcgagcacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccggtcagaaggct
gaggccatcgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacttcc
tgtgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttctttggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagcattccccacagcgatataacgggctctggactctctggtcctttcagggatgtg
tcctcagtggaggtactgatgaactaccaccagagcttgaagagcgaggtggaggcgcgc
agtaagagtgtgctgcagtgcatcgagatgggcaagacgctgctggccgcgcgcaaccct
gctgctgaggagatcaaggagaagctggatacggtggtggccaagcagtacgagctgtct
gagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtacaccagtttgcc
caggaagcggtggtggccgaggcctggctcacggcccaggagccattcatcaacagcaag
gagttgggcgccagcgtggatgaggtggagcagctcatccgccgccacgaggccttccgc
aaggccgccgccacctgggaggagcgcttcagctcactacgacgcctcactacggtggag
aagctgaaagcagagcagagtaagctccctcccacccccctgctgggtcgtaaggtgttc
ctggacccccaggagacgtcccctgcacggagccagggctcccccctgatgagacggatc
ctttatgagcaggctgagcccagagccgagaggcccccccaggatccctcgccctcctcc
gtggcccaccgcctgggatccaccgtggccaactacacccccatactgaatggctccagt
agctaccgcagcagcctggaggcccgtgccatccccgtgatggggggagtggttgggggt
gtagtgggggtggcagccggcctgggaacagccactatggaggccagaggggtggcaaca
aatttagggaccactgctgccatggaggtccgaggggtggcagcagggtttgggacttcc
acctcggaagccagagggttggcagcaggattggtcacccccgcggtcgaggccaaaggg
atagctgcaagcttggtgactggtgcagctgccgcagtggaggtgaaagcctcgcagtac
ctccggcagcctaagatcaaacacatggacgacatggtgacgcccatgctggtggcctgt
aggctggagaaggcgagagagaaggaggtgagagagagggagcagagagagagggagaga
gatattgggttaatggagcccgcgccggtgatgccggtgatggccgaggtggtgctccag
gagatggggatgggcagggagaggctgaacagcgagcccagcagcagagaccaccgggca
gggagcagccggtcggagccccagcagagagacagggacagagacagtagggacagtagg
gacagtcacagggaagccaggctggagcgccagcactctagtgaggcgctgatgatccag
gcgcggcgggatgagctgccccaggaggtgtggcgggaacgggccgagcgcaaagagagg
aaactggagaggcagacgtccagcgagcaggagggccacggacacgagggccggaggaaa
gaccgccaccggacagagagacaggagtccagtgaacacgacacagccaaggagcagtca
gacagacgttctacggagaaaaggtcaggcggccagaccttgtttgacatagtggagcaa
ctaaaagagagagaggcagcaacggcccgaggggaggtccctaaagtgccaaacggtgtg
ccagagaagtcttccggacgtccagaccggccacgagcacgggaccgccccaagccccgg
cggagaccccggcccaaggacccctctgcaggagaggccaccaccacccggcggtcgcgc
tcggcgccagagccagggatggcccagagcgtgagcccctcggtcccccagccacccagc
cacacagcccaccacgagggcttcctcttccgcaagctggacatcgagaccatgaggaag
agctctaacagcagatcctgggtcaacctgtactgtgtgctcaacaaaggagagataggc
ttctataaggatgctaagaacaccaccacaccttacaacaacgagcccatgctcaacctc
ggccactgccactgcgacgtcacccttggatacaagaagaagaaaaacgtctttacgctt
aaaacgaaagacggaagtgaatttctgttccatgcaaaggatgagtcacaggatgatcta
aaggcctggaccaccaacatcaacaagagcatcgcagagcatgaggagattgccaaatgg
ggtcagccccagcctactacctcatccacggacgagggcacgcgccgcgacgccagcaag
gccgataacaagtcagaccggggggaaaggccgcagagggccgagcgctctgagaggtcg
gataagggtgagaccaaattggacaccaaacgttcagaaaggtccagcaagaagaaatga
DBGET
integrated database retrieval system
