Coregonus clupeaformis (lake whitefish): 121562597 Help Entry 121562597         CDS       T08357                                  Name (RefSeq) collagen alpha-2(VI) chain   KO K06238   collagen type VI alpha Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04510   Focal adhesion cclu04512   ECM-receptor interaction cclu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121562597  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121562597   09142 Cell motility    04820 Cytoskeleton in muscle cells     121562597  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cclu04147]     121562597    00536 Glycosaminoglycan binding proteins [BR:cclu00536]     121562597 Exosome [BR:cclu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    121562597 Glycosaminoglycan binding proteins [BR:cclu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121562597  Hyaluronan   Extracellular matrix or blood plasma proteins    121562597 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 Motif Other DBs NCBI-GeneID:  121562597 NCBI-ProteinID:  XP_045071307 LinkDB All DBs Position Unknown AA seq 1070 aa AA seqDB search MKHVFLFLCCLAATLSQQPGRIDPHEDPKLHEGPGPHTHTHTETVVITYNWTHVDNHSTP KPPSPCDQVIECPIDLYFVMDSSESIALQQPPPGSLVKRVAEWTREFALRLREEVYNRQV KISWFMGGLHFSQTQELFSEITSRDKFVKNMDAIDWLKSYLGKGTYTDCALDKMTEEMQR HDLRGHNSVRFAVVVTDGHVTGAPCGGVKVSAERARDQRISLFSVAASKVVEEAGMGLIA SSPAGVYRSDYMAVNVTDLKACHSPPCDSSTGKIVTSSINNIIKAMKYQAYLQCSKLQCL ELPGPPGPKGNPGPKGVKGGVGLSGAKGTKGKQGDSGIEGPIGPAGHKGAIGLKGEKGEF GSGGTKGVSGEHGRDGTDGQKGKIGRIGTYGCKGDPGERGPDGYPGGAGDIGPPGDHGEK GDPGHNGKPGPAGPPGEAGLPSYPGSPGIPGSPGIKGKPGLNGGPGPKGQAGRPGDPGPK GLHGRAGPKGGEGEPGLQGKPGPHGDIGLKGSKGGPGLPGPRGHHGDNGPDGPMGAAGET GDPGQTGPHGDPGPKGDKGRDGFNYPGQRGETGVRGDKGHPGPLGSRGNCGSKGEAGKKG PNGEPGHPGQQGVDGRRGARGGPGAPGDPGPEGDPGLSDCDVMSYIRETCGCCDCEKRCG ALDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSMATHPHSETGTRVGVVQYSHNGTFE AIRLNDSNIDSIAAFKVAVKNLQWIAGGTWTPSALKFAYDHLIRDSRRTRAKVSVVVITD GRFDPRDDDSLLTYLCADPSVDVNAIGVGDMFGREGQHESLESIACQRHDRVTGMTRFAD LVADNFIDRMETVLCPEPIIVCPDIPCVTEPAVAQCVDRPVDLVFLLDGSERLGHENFNQ VRDFVQHLANRLTLAQNKNAGQGARMALLQYGGEEEHHLAFYLTHDLPSILEGLASMDYH DMSSSVVGPAISHTVDHVLLQLNVRQTRRNAELNFVFITDGVTGRKGLKEGVDAMRNNQA VSTVIAMGTDVEQEVLEKLALKDQHAIFKGTDFSELNKHSFLDRFLQWVC NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atgaaacatgtgtttctgtttctgtgctgcctcgcagcaaccctttcacaacaacctgga agaatagacccacatgaagatcccaaacttcacgaaggaccaggaccccacactcacaca cacacagaaaccgtcgttatcacatacaattggacacacgtagataaccactctacaccc aaacctccatccccctgtgatcaagtgattgagtgtcccattgacctatacttcgtgatg gactcctctgagagcatcgccctgcagcagccccctccaggaagcctggtgaagagggtg gcagagtggaccagggagtttgccctgaggctccgggaggaggtgtacaacagacaggtg aagatcagctggtttatggggggactccacttctcccagacacaggagctcttcagtgag atcaccagcagagataaatttgtcaagaatatggatgctatcgactggttaaagtcttac ctgggcaaaggtacctacactgactgtgccctggacaagatgaccgaggagatgcagcgc cacgatctccggggacacaactctgtccgcttcgctgtggtggtcactgacggccatgtg actggtgccccctgtgggggggtcaaggtgtctgcagaacgggctagagaccagcgcatc agcttgttctcagtagctgcttccaaggtggtggaggaagcagggatggggctgatcgct agctctcctgcaggggtctaccgctccgactacatggctgtcaatgtcacagaccttaaa gcctgtcacagtccaccatgtgactcctccactgggaaaatagtcacatcatccatcaac aacattatcaaagctatgaaatatcaagcctatctgcagtgttccaaactccagtgtctg gagcttccaggtcccccaggtccgaagggaaacccaggaccaaagggagtgaaaggagga gttgggctttcaggcgctaaaggaaccaaaggaaaacagggggactctggtattgaaggt ccgattggtcccgcaggtcacaagggtgcgattggtctgaaaggtgaaaagggtgaattt ggatcaggtggaaccaagggagtgtcaggagaacacggcagggatgggacagatgggcag aagggtaaaattggtcggatcggaacttatggttgtaaaggagatccgggtgaaaggggc ccagatggttatccgggaggtgctggtgatataggaccgcccggtgaccacggagagaag ggagaccctggtcataatggcaaaccaggtcccgctggacctcctggagaagctggacta ccgagttatccaggaagccctggaattccaggctcaccgggaataaaaggaaaaccagga ctcaacggtggaccgggaccaaaaggccaagctgggcgaccaggagaccctggacctaag ggacttcatggacgagctggacctaaaggaggagagggtgaacctggtctacaagggaag ccaggtcctcatggggatatcggcctcaaaggatctaagggaggtccagggctgccaggt ccaagaggacatcatggagataatggaccagatggaccgatgggagctgctggagagact ggcgatcctggacagactggacctcatggagatcctggaccaaagggtgacaaaggaaga gatgggttcaactatcctggacaaagaggagaaacgggagtcagaggggataaagggcat ccaggccctttgggaagcagagggaactgtggcagcaaaggagaagctgggaagaaagga ccaaatggtgaaccggggcatccaggtcaacagggagtggatgggaggagaggagccaga ggaggacctggggctcctggtgatcctggaccagagggagaccctggcctttctgactgt gatgtcatgagctacatcagagagacatgtggttgttgtgactgtgagaagcggtgtggg gcgctggacatcgtgtttgtgattgacagctcagagtcggtgggtctgaccaacttcacc ctggagaagaactttgtcatcaacaccatcaacaggctgggctccatggcaacacaccca cattcagagacgggaaccagggttggcgttgtgcagtacagtcacaacgggaccttcgag gccatccgactcaacgactccaacatagactccatcgctgccttcaaggtggctgtgaag aacctccagtggatagccgggggcacctggactccctccgctctgaagttcgcctacgac cacctgatcagggacagccggcggaccagagccaaggtgtcggtcgtggtcatcacggac gggcgcttcgacccgcgggatgatgactctctgctgacctacctctgtgccgaccccagc gtggacgtgaacgccatcggggtcggggacatgttcggccgggagggacagcatgagagc ctggagtccattgcgtgccagaggcatgatcgcgtgacggggatgacgcgtttcgctgac cttgtggcggataactttatagacaggatggagaccgtgctctgccccgaacccattatt gtatgtcctgacattccctgcgtaacagaaccagcggtggcacagtgtgttgatcgacct gtagacctggtgttccttctggacggttctgagcgtctcggtcatgagaacttcaaccaa gtccgtgacttcgtccagcacttggcgaaccgcttgacgctggcgcagaacaagaacgcc ggccagggagcccgcatggcgctgctgcagtacggaggagaagaggagcaccacctggcc ttttatctgacacacgacctcccgtccatcctagagggcctggccagcatggactatcat gacatgtcttcttctgtggtggggccggccatctcacacaccgtagaccacgtcttgttg cagctcaacgtccgccagaccagacgcaacgccgagctcaacttcgtcttcatcactgac ggcgtcaccgggaggaaggggctgaaggagggggtcgacgccatgcgaaacaaccaggca gtctccacggtgatcgccatggggaccgacgtggaacaggaagtgttggagaagctggcc ttaaaggaccagcacgccatctttaaaggaacagacttctctgagctcaacaagcacagc ttcctagatcggttccttcagtgggtctgttag

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